Return to main results Retrieve Phyre Job Id

Job DescriptionP54901
Confidence43.91%DateThu Jan 5 12:06:05 GMT 2012
Rank422Aligned Residues46
% Identity11%Templatec3mklB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:hth-type transcriptional regulator gadx; PDBTitle: crystal structure of dna-binding transcriptional dual regulator from2 escherichia coli k-12
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50...
Predicted Secondary structure 















Query SS confidence 















































Query Sequence  APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISE
Query Conservation        
  

   

  

      

  

  
 

 


  


 
Alig confidence 



















..

























Template Conservation 
         

   
    ..     
  

     
   
 
 

 
Template Sequence  SNALQPNXRTRVCTVINNNI. . AHEWTLARIASELLXSPSLLKKKLRE
Template Known Secondary structure 


SS

ST..TS


TS
Template Predicted Secondary structure 






..







Template SS confidence 















































   136...140.........150..... ....160.........170.........180.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions