Job Description P54901 Confidence 56.24% Date Thu Jan 5 12:06:05 GMT 2012 Rank 341 Aligned Residues 105 % Identity 11% Template c3bjaA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, marr family, putative; PDBTitle: crystal structure of putative marr-like transcription regulator2 (np_978771.1) from bacillus cereus atcc 10987 at 2.38 a resolution Resolution 2.38 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		R	R	C	Q	I	L	L	T	L	F	Q	P	G	L	T	A	T	M	A	T	F	S	E	L	N	G	V	D	D	D	I	A	S	L	D	I	S	E	T	G	R	E	I	L	R	Y	H	Q	L	T	L	T	T	G	Y	D	G	S	.	.	Y	R	V	E	G	T	V	L	N	Q	R	L	C	L	F	H	W	L	R	R
Query Conservation																																																												.	.
Alig confidence																																											.	.	.				.											.	.												.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.				.																								.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	Q	F	G	V	I	Q	V	L	A	K	S	G	K	V	S	X	S	K	L	I	E	N	X	G	C	V	P	S	N	X	T	T	X	I	Q	R	X	K	R	.	.	.	D	G	Y	.	V	X	T	E	K	N	P	N	D	Q	R	E	T	L	V	Y	L	T	K	K	G	E	E	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														S		S											S	S			T	T											.	.	.	T	T	S	.							S	S		T	T													.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.				.																								.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	R	L	C	P	S	F	I	T	S	Q	F	T	P	A	L	K	S	E	L	K	R	R	G	I	A	R	N	F	Y	D	D	T	N	L	Q	A	L	V	N	L	C	S	R	R	L	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	T	K	K	Q	V	D	V	Q	Y	S	D	F	L	K	E	N	C	G	C	F	T	K	E	E	E	G	I	L	E	D	L	L	L	K	W	K	K	H	L	N
Template Known Secondary structure		.	.	.	.	.	.	.	.																				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions