 |
Job Description | P54901 | Confidence | 86.19% | Date | Thu Jan 5 12:06:05 GMT 2012 |
Rank | 161 | Aligned Residues | 40 |
% Identity | 18% | Template | c2qufB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:transcription factor pf0095; |
PDBTitle: crystal structure of transcription factor axxa-pf0095 from pyrococcus2 furiosus
|
Resolution | 2.80 Å |
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | R | R | C | Q | I | L | L | T | L | F | Q | P | G | L | T | A | T | M | A | T | F | S | E | L | N | G | V | D | D | D | I | A | S | L | D | I | S | E | T | G | R |
Query Conservation |   |
|
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |
|
|   |
|
|
|   |   |
|
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |   |
| . | . |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
Template Sequence |   |
K | V | R | R | D | L | L | S | H | L | . |
. |
T | A | M | E | A | Y | F | S | L | L | S | S | K | V | S | V | S | S | T | A | V | A | K | H | L | K | I | M | E | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . | T |
| T | T | T |
| S | S | S | S |
| S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | |
|
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|