Job Description P54901 Confidence 95.23% Date Thu Jan 5 12:06:05 GMT 2012 Rank 29 Aligned Residues 113 % Identity 19% Template c2it0A_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:iron-dependent repressor ider; PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii Resolution 2.60 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		S	A	P	Q	R	R	C	Q	I	L	L	T	L	F	Q	P	G	L	T	A	T	M	A	T	F	S	E	L	N	G	V	D	D	D	I	A	S	L	D	I	S	E	T	G	R	E	I	L	R	Y	H	Q	L	T	L	T	T	G	Y	D	G	S	Y	R	V	E	.	.	G	T	V	L	N	Q	R	L	C	L	F	H
Query Conservation																																																																				.	.
Alig confidence																																															.	.	.				.	.	.													.	.
Template Conservation																																															.	.	.				.	.	.
Template Sequence		D	T	T	E	M	Y	L	R	T	I	Y	D	L	E	E	E	G	V	T	P	L	R	A	R	I	A	E	R	L	D	Q	S	G	P	T	V	S	Q	T	V	S	R	M	E	R	.	.	.	D	G	L	.	.	.	L	R	V	A	G	D	R	H	L	E	L	T	E	K	G	R	A	L	A	I	A	V	M	R	K	H
Template Known Secondary structure		S															T	T												T	T																.	.	.	T	T	S	.	.	.					T	T
Template Predicted Secondary structure																																															.	.	.				.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	R	R	G	F	R	L	C	P	S	F	I	T	S	Q	F	T	P	A	L	K	S	E	L	K	R	R	G	I	A	R	N	F	Y	D	D	T	N	L	Q	A	L	V	N	L	C	S	R	R	L	Q	K	R	F	E	S	R	D	I	H	F	L	C	L	Y	L
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	A	E	R	L	L	V	D	V	I	G	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	E	E	V	H	A	E	A	C	R	W	E	H	V	M	S	E	D	V	E	R	R	L	V	K	V	L
Template Known Secondary structure											T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	T													T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.																											.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions