Return to main results Retrieve Phyre Job Id

Job DescriptionP54901
Confidence47.70%DateThu Jan 5 12:06:05 GMT 2012
Rank386Aligned Residues40
% Identity13%Templatec2fu4B_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:ferric uptake regulation protein; PDBTitle: crystal structure of the dna binding domain of e.coli fur (ferric2 uptake regulator)
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20......... 30.........40 .........50......
Predicted Secondary structure 


.


.....


Query SS confidence 












.










. . . . .















Query Sequence  RCQILLTLFQPGL. TATMATFSELN. . . . . GVDDDIASLDISETGR
Query Conservation     

  

    .  

  

  
..... 

 


  


 
  
Alig confidence 












.










.....















Template Conservation 
  

  
      
 

 

   
      

 




 
  
  
Template Sequence  RLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDD
Template Known Secondary structure  TSGGGSSTT



Template Predicted Secondary structure 











Template SS confidence 













































   1920.........30.........40.........50.........60....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions