Job Description P54901 Confidence 42.74% Date Thu Jan 5 12:06:05 GMT 2012 Rank 429 Aligned Residues 50 % Identity 14% Template c2a6eF_ PDB info PDB header:transferase Chain: F: PDB Molecule:rna polymerase sigma factor rpod; PDBTitle: crystal structure of the t. thermophilus rna polymerase2 holoenzyme Resolution 2.80 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		L	S	A	P	Q	R	R	C	Q	I	L	L	T	L	F	Q	P	G	L	T	A	T	M	A	T	F	S	E	L	N	G	V	D	D	D	I	A	.	.	.	.	S	L	D	I	S	E	T	G	R	E	I	L	R	Y	H	Q	L	T
Query Conservation																																							.	.	.	.
Alig confidence																		.	.	.	.	.																	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		L	S	E	R	E	A	M	V	L	K	L	R	K	G	L	I	.	.	.	.	.	D	G	E	E	V	G	A	F	F	G	V	T	R	E	R	I	R	Q	I	E	N	K	A	L	R	K	L	K	Y	H	E	S	R	T	R	K	L	R
Template Known Secondary structure		S		T	T											T	T	.	.	.	.	.								S	S	S	S																							T	T	S	S	S
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.						.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions