Return to main results Retrieve Phyre Job Id

Job DescriptionP54901
Confidence99.18%DateThu Jan 5 12:06:05 GMT 2012
Rank6Aligned Residues90
% Identity14%Templatec1tvmA_
PDB info PDB header:transferaseChain: A: PDB Molecule:pts system, galactitol-specific iib component; PDBTitle: nmr structure of enzyme gatb of the galactitol-specific2 phosphoenolpyruvate-dependent phosphotransferase system
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   335....340.........350.........360........ .370.........380.........390.........400.........410..
Predicted Secondary structure 











.





















.
Query SS confidence 

































.











































.
Query Sequence  DLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN. IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLT.
Query Conservation        
 


  
   
  
   
   
     .
                 





 

       


 

  
 .
Alig confidence 

































.











































.
Template Conservation     







 





 

  

        
   
               
 



  
      



 
 



 
Template Sequence  QGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSG
Template Known Secondary structure  S
SSS
S
SSTT


TTTTTTSTTS
SSS




STT



S
Template Predicted Secondary structure 

































Template SS confidence 















































































   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   413......420....
Predicted Secondary structure  ...
Query SS confidence  . . .











Query Sequence  . . . THQQEQIRKMLE
Query Conservation  ...  
   
   
 
Alig confidence  ...











Template Conservation     
    

 
 

Template Sequence  VGIEALQNKILTILQ
Template Known Secondary structure  SS
Template Predicted Secondary structure 


Template SS confidence 














   98.100.........110..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions