Return to main results Retrieve Phyre Job Id

Job DescriptionP54901
Confidence96.17%DateThu Jan 5 12:06:05 GMT 2012
Rank20Aligned Residues96
% Identity13%Templatec1o57A_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:pur operon repressor; PDBTitle: crystal structure of the purine operon repressor of2 bacillus subtilis
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20...... ...30.........40.........50.........60... ......70....... ..80......
Predicted Secondary structure 

.










..



.
Query SS confidence 















.




































. .













.








Query Sequence  LSAPQRRCQILLTLFQ. PGLTATMATFSELNGVDDDIASLDISETGREILRYHQ. . LTLTTGYDGSYRVE. GTVLNQRLC
Query Conservation   
  

   

  

 .     

  

  
 

 


  


 
   
     ..
 
      
  
 .
 
   
  
Alig confidence 















.




































..













.








Template Conservation    
  

          
     
         



 


             
      
  


   
         
Template Sequence  FRRSGRLVDLTNYLLTHPHELIPLTFFSERYESAKSSISEDLTIIKQTFEQQGIGTLLTVPGAAGGVKYIPKMKQAEAEE
Template Known Secondary structure 

TSTT

B
TT

TTS
STT



Template Predicted Secondary structure 






























Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   87..90.........100......
Predicted Secondary structure 
Query SS confidence 



















Query Sequence  LFHWLRRGFRLCPSFITSQF
Query Conservation 
   
               
Alig confidence 



















Template Conservation      
   
    




  
Template Sequence  FVQTLGQSLANPERILPGGY
Template Known Secondary structure  T
GGGTTT
Template Predicted Secondary structure 








Template SS confidence 



















   83......90.........100..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions