Job Description P54901 Confidence 99.98% Date Thu Jan 5 12:06:05 GMT 2012 Rank 2 Aligned Residues 206 % Identity 14% Template c1h99A_ PDB info PDB header:transcriptional antiterminator Chain: A: PDB Molecule:transcription antiterminator lict; PDBTitle: prd of lict antiterminator from bacillus subtilis Resolution 1.55 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	Y	D	D	T	N	L	Q	A	L	V	N	L	C	S	R	R	L	Q	K	R	F	E	S	R	D	I	H	F	L	C	L	Y	L	Q	Y	C	L	L	Q	H	H	A	G	I	T	P	Q	F	N	P	L	Q	R	R	W	A	E	S	C	L	E	F	Q	V	A	Q	E	I	G	R	H	W	Q	R	R	A	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	E	C	M	E	V	S	E	E	I	I	S	Y	A	K	L	Q	L	G	K	K	L	N	D	S	I	Y	V	S	L	T	D	H	I	N	F	A	I	Q	R	N	Q	K	G	L	D	I	K	N	A	L	L	W	E	T	K	R	L	Y	K	D	E	F	A	I	G	K	E	A	L	V	M	V	K	N	K	T	G	V
Template Known Secondary structure																						S				T																			T	T						T	T								T																			S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	P	P	D	E	P	L	F	M	A	L	L	F	S	M	L	R	V	P	D	P	L	R	D	A	H	Q	R	D	R	Q	L	R	Q	S	I	K	R	L	V	N	H	F	R	E	L	G	N	V	R	F	Y	D	E	Q	G	L	C	D	Q	L	Y	T	H	L	A	Q	A	L	N	R	S	L	F	A	I	G	I	D
Query Conservation
Alig confidence																											.	.	.	.
Template Conservation																											.	.	.	.
Template Sequence		S	L	P	E	D	E	A	G	F	I	A	L	H	I	V	N	A	E	L	N	E	E	M	P	N	.	.	.	.	I	I	N	I	T	K	V	M	E	E	I	L	S	I	V	K	Y	H	F	K	I	E	F	N	E	E	S	L	H	Y	Y	R	F	V	T	D	L	K	F	F	A	Q	R	L	F	N	G	T	H	M	E
Template Known Secondary structure																				T	T	S					.	.	.	.																				T					T	T	S																				T
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		282	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		N	T	.	L	P	E	E	F	A	R	L	Y	P	R	L	V	R	T	T	R	A	A	L	A	G	F	E	S	E	Y	G	V	H	L	S	D	E	E	S	G	L	V	A	V	I	F	G	A	W	L	M
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		D	D	F	L	L	D	T	V	K	E	K	Y	H	R	A	Y	E	C	T	K	K	I	Q	T	Y	I	E	R	E	Y	E	H	K	L	T	S	D	E	L	L	Y	L	T	I	D	I	E	R	V	V	K
Template Known Secondary structure			T										T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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