Job Description P0A8K8 Confidence 5.25% Date Thu Jan 5 11:08:03 GMT 2012 Rank 10 Aligned Residues 70 % Identity 13% Template c3hfxA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:l-carnitine/gamma-butyrobetaine antiporter; PDBTitle: crystal structure of carnitine transporter Resolution 3.15 Å

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		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	L	L	F	E	A	G	K	K	G	F	A	L	Y	I	T	M	F	P	S	Y	Q	L	I	Y	G	V	L	A	V	I	P	I	L	F	V	W	V	Y	W	T	W	C	I	V	L	L	G	A	E	I	T	V	T	L	G	E	Y	R	K	L	K	Q	A	A	E	Q	E	E	D
Query Conservation
Alig confidence																								.																																												.
Template Conservation																								.																																												.
Template Sequence		F	P	P	L	I	I	V	G	I	L	C	W	L	T	V	R	D	L	D	A	A	N	.	V	V	I	N	A	V	F	S	Y	V	T	N	V	W	G	W	A	F	E	W	Y	M	V	V	M	L	F	G	W	F	W	L	V	F	G	P	Y	A	K	K	R	L	G	.	N	E	P	P	E
Template Known Secondary structure														T	T	T	T							.																																			S	S	S	T	T	S		S	S	.	S	S			S
Template Predicted Secondary structure																								.																																												.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions