Job Description P0A8K8 Confidence 23.15% Date Thu Jan 5 11:08:03 GMT 2012 Rank 2 Aligned Residues 222 % Identity 14% Template c2xq2A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: structure of the k294a mutant of vsglt Resolution 2.73 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	N	M	T	T	L	A	G	N	L	A	Y	V	S	L	L	S	L	V	P	L	V	A	V	V	F	A	L	F	A	A	F	P	M	F	S	D	V	S	I	Q	L	R	H	F	I	F	A	N	F	L	P	A	T	G	D	V	I	Q	R	Y	I	E	Q	F	V	A	N	S	N	K	M	T	A	V	G	A	C	G
Query Conservation
Alig confidence																																																																				.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence		K	S	V	S	E	A	Q	K	G	I	V	F	A	A	F	L	A	L	I	V	P	F	L	V	V	L	P	G	I	A	A	Y	V	I	T	S	D	P	Q	L	M	A	S	L	G	N	L	P	S	A	A	N	A	D	K	A	Y	P	W	L	T	Q	F	L	P	V	.	.	.	.	.	G	V	K	G	V	V	F	A	A
Template Known Secondary structure		S																T	T	T						T											T														S	T	B	G	G	G								T	S			.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.						.	.	.	.	.	.	350	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.												.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	V	T	A	L	L	L	M	Y	S	I	D	S	A	L	N	T	I	W	.	.	.	.	.	.	.	.	.	.	.	R	S	K	R	A	R	P	K	I	Y	S	F	A	V	Y	W	M	I	L	T	L	G	P	L	L	A	G	A	S	L	A	I	S	S	Y	L	L	S	L	R	W	A	S	D	L	N	T	V	I
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	A	A	I	V	S	S	L	A	S	M	L	N	S	T	A	T	I	F	T	M	D	I	Y	K	E	Y	I	S	P	D	S	G	D	H	K	L	V	N	V	G	R	T	A	A	V	V	A	L	I	I	A	A	L	I	A	P	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	I	G	Q	C	F
Template Known Secondary structure																									T					T		S																										G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G		B
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.														.	.	420	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	V	L	R	I	F	P	L	L	L	S	W	I	S	F	W	L	L	Y	S	I	V	P	T	I	R	V	P	N	R	D	A	I	V	G	A	F	V	A	A	L	L	F	E	A	G	K	K	G	F	A	L	Y	I	T	M	F	P	S	Y	Q	L	I	Y	G	V	L	A	V	I	P	I	L	F	V	W	V	Y	W
Query Conservation
Alig confidence																											.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	Y	I	Q	E	Y	T	G	L	V	S	P	G	I	L	A	V	F	L	L	G	L	F	W	K	.	K	T	T	S	K	G	A	I	I	G	V	V	A	S	I	P	F	A	L	F	L	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	P	L	S	M	P	F	M	D	Q
Template Known Secondary structure									T	T	T															T	.	T																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																											.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.																						.	.	.	.	.	.	.	480	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	C	I	V	L	L	G	A	E	I	T	V	T	L	G	E	Y	R	K	L	K	Q	A	A	E	Q	E	E	D	D	E	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	Y	T	L	L	F	T	M	V	V	I	A	F	T	S	L	S	T	S	I	N	D	D	D	P	K	G	I	S	V	T	S
Template Known Secondary structure																						S	S	S	S		T	T						S
Template Predicted Secondary structure
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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