Job Description P0ADV1 Confidence 98.75% Date Thu Jan 5 11:21:54 GMT 2012 Rank 2 Aligned Residues 118 % Identity 19% Template c3my2A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:lipopolysaccharide export system protein lptc; PDBTitle: crystal structure of lptc Resolution 2.20 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																														.	.	.	.	.
Query SS confidence																														.	.	.	.	.
Query Sequence		H	I	E	S	D	Q	Q	S	L	D	M	Q	G	N	V	V	T	F	T	G	N	V	I	V	T	Q	G	T	.	.	.	.	.	I	K	I	N	A	D	K	V	V	V	T	R	P	G	G	E	Q	G	K	E	V	I	D	G	Y	G	K	P	A	T	F	Y	Q	M	Q	D	N	G	K	P	V	E	G	H	A	S	Q
Query Conservation																														.	.	.	.	.
Alig confidence																														.	.	.	.	.												.				.	.	.	.	.											.
Template Conservation																																														.				.	.	.	.	.											.
Template Sequence		R	L	I	A	Q	H	V	E	Y	Y	S	D	Q	A	V	S	W	F	T	Q	P	V	L	T	T	F	D	K	D	K	I	P	T	W	S	V	K	A	D	K	A	K	L	T	.	N	D	R	.	.	.	.	.	X	L	Y	L	Y	G	H	V	E	V	.	N	A	L	V	P	D	S	Q	L	R	R	I	T	T	D	N
Template Known Secondary structure						S	S					T	T	T	T						S								T	T										S						.	T	T	S	.	.	.	.	.											.				S	S	S		S
Template Predicted Secondary structure																																														.				.	.	.	.	.											.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.						.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	H	Y	E	L	A	K	D	F	V	V	L	T	G	N	A	Y	L	Q	Q	V	D	S	N	I	K	G	D	K	I	T	Y	L	V	K	E	Q	K	M	Q	A	F	S	D	K	G	K	R	V	T	T	V	L	V
Query Conservation
Alig confidence																																														.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		A	Q	I	N	L	V	T	Q	D	V	T	S	E	D	L	V	T	L	Y	G	T	T	F	N	S	S	G	L	K	X	R	G	N	L	R	S	K	N	A	E	L	I	E	K	.	.	.	.	V	R	T	S	Y	E
Template Known Secondary structure						T	T	T														S	S												T	T	T	T								.	.	.	.				T	T
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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