Job Description P0ADV1 Confidence 2.42% Date Thu Jan 5 11:21:54 GMT 2012 Rank 35 Aligned Residues 42 % Identity 14% Template c2zkrt_ PDB info PDB header:ribosomal protein/rna Chain: T: PDB Molecule:rna expansion segment es39 part iii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		127	.	.	130	.	.	.	.	.		.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.						.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure											.			.																		.	.	.	.	.
Query SS confidence											.			.																		.	.	.	.	.
Query Sequence		A	Y	L	Q	Q	V	D	S	N	.	I	K	.	G	D	K	I	T	Y	L	V	K	E	Q	K	M	Q	A	F	S	.	.	.	.	.	D	K	G	K	R	V	T	T	V	L	V	P	S	Q
Query Conservation											.			.																		.	.	.	.	.
Alig confidence											.			.																		.	.	.	.	.
Template Conservation
Template Sequence		V	Q	V	V	R	G	H	Y	K	G	Q	Q	I	G	K	V	V	Q	V	Y	R	K	K	Y	V	I	Y	I	E	R	V	Q	R	E	K	A	N	G	T	T	V	H	V	G	I	H	P	S	K
Template Known Secondary structure						S	S	T	T	T	T			S								T	T	T	T					T	T						S	S								B		G	G	G
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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