Job Description Q1PI54 Confidence 1.65% Date Thu Jan 5 12:33:28 GMT 2012 Rank 67 Aligned Residues 87 % Identity 9% Template c3etvA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:protein transport protein tip20,linker,protein PDBTitle: crystal structure of a tip20p-dsl1p fusion protein Resolution 1.94 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		F	N	L	F	I	K	K	F	Q	S	V	S	L	L	E	E	Y	L	R	S	S	P	Y	V	M	D	Q	L	K	E	A	K	I	D	E	L	D	L	H	R	A	I	V	A	L	S	E	K	M	K	A	V	D	D	N	A	S	K	K	K	D	E	P	S	L	Y	T	S	W	T	L	S	F	T	A	P	T	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																														.	.																																																.	.	.
Template Conservation																														.	.
Template Sequence		Y	D	T	F	M	D	F	V	A	Q	Q	Y	F	P	K	G	S	L	D	N	Q	A	W	F	I	L	D	M	.	.	T	S	A	D	S	Q	E	Q	V	R	A	K	L	N	T	I	M	K	E	Y	M	N	L	S	R	I	V	S	M	I	K	N	S	I	F	I	S	G	K	E	I	S	Y	E	N	E	K	N	I	L
Template Known Secondary structure															G	G	G	S			T	T	S					T		.	.	S	S																			T	S												T	T		T	T							T	T	T	T
Template Predicted Secondary structure																														.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
											127	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	S	E	E	A	Q	T	V	L	S	G	Y	I
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	F	S	K	S	C	V	S	T	V	L	T	S	F	E	A	V	C	D	F	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions