Job Description P45581 Confidence 7.24% Date Thu Jan 5 12:03:27 GMT 2012 Rank 56 Aligned Residues 46 % Identity 20% Template c3htuE_ PDB info PDB header:protein transport Chain: E: PDB Molecule:vacuolar protein-sorting-associated protein 25; PDBTitle: crystal structure of the human vps25-vps20 subcomplex Resolution 2.00 Å

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		36	.	.	.	40	.	.	.	.	.																.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	D	Y	F	D	M	L	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	C	S	V	V	E	A	S	G	A	S	L	E	K	G	R	H	D	Q	L	L	T	A	L	R	A	L	L	L	S	R	K	N	P	F
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	E	W	G	K	L	I	Y	Q	W	V	S	R	S	G	Q	N	N	S	V	F	T	L	Y	E	L	T	N	G	E	D	T	E	D	E	E	F	H	G	L	D	E	A	T	L	L	R	A	L	Q	A	L	Q	Q	E	H	K	A	E	I
Template Known Secondary structure															T	S	S		S	S											S	G	G	G	T	T	S	T	T	T	T																T	T	S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions