Return to main results Retrieve Phyre Job Id

Job DescriptionP75882
Confidence14.72%DateThu Jan 5 12:15:23 GMT 2012
Rank24Aligned Residues117
% Identity18%Templated2gufa1
SCOP infoTransmembrane beta-barrels Porins Ligand-gated protein channel
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GTGLFDGEYLVASKQAGPFDFTLGMAWGYAGNAGNITNPFCRVSDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQTP
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Template Sequence  GKARIKGVEATANFDTGPLTHTVSYDYVDARNAIT. DTPLLRRAKQQ. . . . . . . . . . . . . . . . . . . . . . . VKYQLDWQLY
Template Known Secondary structure  TTTTT.

B
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Query Sequence  WNPLRLKLEYDGNNYQNDF. . . . . . AGKLPQASHFNVGAVYRAASWADLNLSYER. . . . . . . GNTLMFGFTLRT
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Template Sequence  DFDWGITYQYLGTRYDKDYSSYPYQTVKMGGVSLWDLAVAYPVTSHLTVRGKIANLFDKDYAGREYTLSGSYTF
Template Known Secondary structure  T


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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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