Job Description P75882 Confidence 46.34% Date Thu Jan 5 12:15:23 GMT 2012 Rank 7 Aligned Residues 106 % Identity 24% Template d1qjpa_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 1.65

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	S	V	A	L	F	P	W	L	E	G	T	I	R	Y	T	D	V	R	T	R	K	Y	S	Q	W	E	D	F	S	G	D	Q	S	Y	K	D	K	S	F	D	F	K	L	R	L	W	E	E	G	Y	W	L	P	Q	V	A	F	G	K	R	D	I	A	G	T	G	L	F	D	G	E	Y	L	V	A	S	K	Q
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	G	Y	Q	V	N	P	Y	V	G	F	E	M	G	Y	D	W	L	G	R	M	P	Y	A	Y	.	.	.	.	.	.	.	.	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	.	.	.	.	.	.	.	.	.	.	.	V	W	R	A	D	T	Y
Template Known Secondary structure									T	T																		.	.	.	.	.	.	.	.															S	S	S	S											.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.									.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.												.	.	.	.	.	.	100
		150	.	.					.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		A	G	P	.	.	.	.	F	D	F	T	L	G	M	A	W	G	Y	A	G	N	A	G	N	I	T	N	P	F	C	R	V	S	D	K	Y	C	H	R	A	E	S	H	D	A	G	D	I	S	F	S	D	I	F	R	G	P	A	S	I	F	G	G	I	E	Y	Q	T	P	W	N	P	L	R	L	K	L	E	Y	D
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		S	N	V	Y	G	K	N	H	D	T	G	V	S	P	V	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	V	E	Y	A	I	T	.	P	E	I	A	T	R	L	E	Y	Q
Template Known Secondary structure			S	S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																																													.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	N	Y	Q	N	D	F	A	G	K	L	P	Q	A	S	H	F	N	V	G	A	V	Y	R	A
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	T	N	.	.	.	.	.	.	.	.	.	.	.	.	G	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.													.	.	.	.	150	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions