Job Description P75882 Confidence 3.47% Date Thu Jan 5 12:15:23 GMT 2012 Rank 89 Aligned Residues 119 % Identity 14% Template d1qj8a_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 1.90

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		526	.	.	.	530								.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.
Query Sequence		V	Y	G	G	Y	.	.	.	.	.	.	.	L	E	T	M	Y	A	G	V	G	S	E	L	L	Y	R	P	L	D	A	C	W	A	L	G	V	D	V	N	Y	V	K	Q	R	D	W	D	N	M	M	R	F	T	D	Y	S	T	P	T	G	F	V	T	A	Y	W	N	P	P	T	L	N	G	V	L	M	K	L	S
Query Conservation							.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	G	G	Y	A	Q	S	D	A	Q	G	Q	M	N	K	M	G	G	F	N	L	K	Y	R	Y	E	E	D	N	S	P	L	G	V	I	G	S	F	T	Y	T	E	K	S	R	T	A	S	S	G	D	Y	N	K	N	Q	Y	Y	G	I	T	A	G	P	A	Y	R	I	N	D	W	A	S	I	Y	G	V	V	G
Template Known Secondary structure												T	T	T																T	T		S																	T	T	S																				T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		599	600	.	.	.	.	.															.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	Q	Y	L	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	G	A	T	I	D	V	A	K	R	F	D	S	G	V	A	V	G	V	W	A	A	I	S	N	V	S	K	D	D	Y	G	E	G	G	F	S	K	G	F	Y	I	S	I
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.
Template Sequence		V	G	Y	G	K	F	Q	T	T	E	Y	P	T	Y	K	N	D	T	S	D	Y	G	F	S	Y	G	A	G	L	Q	F	N	P	M	E	N	V	A	L	D	F	S	Y	E	Q	S	R	I	R	S	V	D	V	G	.	.	.	.	.	.	T	W	I	A	G	V
Template Known Secondary structure												T	T	T																				S	S	T	T													T	T					.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.							.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions