Return to main results Retrieve Phyre Job Id

Job DescriptionP75882
Confidence71.56%DateThu Jan 5 12:15:23 GMT 2012
Rank5Aligned Residues91
% Identity19%Templated1phoa_
SCOP infoTransmembrane beta-barrels Porins Porin
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.. .......160.........170.........180.........190.........200.........210..
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Query Sequence  AGTGLFDGEYLVASKQAGP. FDFTLGMAWGYAGNAGNITNPFCRVSDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQ
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Template Sequence  GFANKTQNFEAVAQYQFDFGLRPSLGYVLS. . . . . . . . . . . . . . . . . KGKDIEGIGDEDLVN. . . . . . . . . YIDVGATYY
Template Known Secondary structure  SS
S

SSS.................SBTTTB

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   249250.........260.........270........ .280.........290... ......300..
 
   213......220.........230.........240.........250.
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Query Sequence  TPWNPLRLKLEYDGNNYQNDFAGKLPQASHFNVGAVYRA
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Template Sequence  FN. KNMSAFVDYKINQLDSDNKLNINNDDIVAVGMTYQF
Template Known Secondary structure  SS.SS


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   303. .....310.........320.........330.........340
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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