Job Description P75882 Confidence 20.59% Date Thu Jan 5 12:15:23 GMT 2012 Rank 19 Aligned Residues 139 % Identity 13% Template d1g90a_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution UNK

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		521	.	.	.	.	.	.	.	.	530	.															.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	Y	G	Q	V	Y	G	G	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	M	Y	A	G	V	G	S	E	L	L	Y	R	P	L	D	A	C	W	A	L	G	V	D	V	N	Y	V	K	Q	R	D	W	D	N	M	M	R	F	T	D	Y	S	T	P	T	G	F	V	T	A	Y	W	N
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																									.
Template Sequence		T	W	Y	T	G	A	K	L	G	F	S	Q	Y	H	D	T	G	F	I	N	N	N	G	P	T	H	E	N	Q	L	G	A	G	A	F	G	G	Y	Q	.	V	N	P	Y	V	G	F	E	M	G	Y	D	F	L	G	R	M	P	Y	K	G	S	V	E	N	G	A	Y	K	A	Q	G	V	Q	L	T	A	K	L	G
Template Known Secondary structure																S	S	S			B	S	S					S	S												.		T	T	T												S		T	T		S	S				S
Template Predicted Secondary structure																																									.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.																	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	P	T	L	N	G	V	L	M	K	L	S	V	G	Q	Y	L	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	G	A	T	I	D	V	A	K	R	F	D	S	G	V	A	V	G	V	W	A	A	I	S	N	V	S	K	D	D	Y	G	E	G	G	F	S	K	G	F	Y	I	S	I
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	F	R	A	D	T	K	S	N	V	Y	G	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q	F	T	N	N	I	G	D	A	H	T	I	G	T	R	P	D	N	G	M	L	S	L
Template Known Secondary structure				S	S	S	S																		S	B	T	T	B																					T	T																B	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		651	.	.	.	.	.	.	.	.	660
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	D	L	M	T	I	G	P	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	S	Y	R	F	G	Q	G	E
Template Known Secondary structure									S	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions