Job Description P75882 Confidence 10.82% Date Thu Jan 5 12:15:23 GMT 2012 Rank 30 Aligned Residues 199 % Identity 16% Template c2x4mD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:coagulase/fibrinolysin; PDBTitle: yersinia pestis plasminogen activator pla Resolution 2.55 Å

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		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.				.	.	.	.	.	.	480	.	.	.	.	.	.				.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure																																	.	.	.														.	.	.																											.	.	.	.
Query SS confidence																																	.	.	.														.	.	.																											.	.	.	.
Query Sequence		F	Y	M	F	Q	L	G	L	M	S	S	A	R	Y	W	F	T	D	H	L	L	L	D	G	G	I	F	T	N	I	Y	.	.	.	N	N	Y	D	K	F	K	S	S	L	L	P	A	.	.	.	D	S	T	L	P	R	V	R	T	H	I	R	D	Y	V	R	N	D	V	Y	L	N	N	L	Q	A	.	.	.	.
Query Conservation																																	.	.	.														.	.	.																											.	.	.	.
Alig confidence																																	.	.	.														.	.	.																											.	.	.	.
Template Conservation
Template Sequence		K	I	K	N	V	A	I	L	K	G	D	I	S	W	D	P	Y	S	F	L	T	L	N	A	R	G	W	T	S	L	A	S	G	S	G	N	M	D	D	Y	A	W	M	N	E	N	Q	S	E	W	T	D	H	S	S	H	P	A	T	N	V	N	H	A	N	E	Y	D	L	N	V	K	G	W	L	L	Q	D	E	N
Template Known Secondary structure																		S	T	T												S	S													S	S		S	S		S						T																		S				S	S
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
																														513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.				.	.	560	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	F	A	D	L	G	N	G	F	Y	G	Q	V	Y	G	G	Y	L	E	T	M	Y	A	G	V	G	S	E	L	L	Y	R	P	L	D	A	C	W	A	L	G	V	D	V	.	.	.	N	Y	V	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.										.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		Y	K	A	G	I	T	A	G	Y	Q	E	T	R	F	S	W	T	A	T	G	G	S	Y	S	Y	N	N	G	A	Y	T	G	N	F	P	K	G	V	R	V	I	G	Y	N	Q	R	F	S	M	P	Y	I	G	L	A	G	Q	Y	R	I	.	.	.	.	N	D	F	E	L	N	A	L	F	K	F	S	D	W	V	R
Template Known Secondary structure																					S						T	T	T	T							T	T																								.	.	.	.	T	T
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		562	.	.	.	.	.	.	.									570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.
Query Sequence		Q	R	D	W	D	N	M	M	.	.	.	.	.	.	.	.	R	F	T	D	Y	S	T	P	T	G	F	V	T	A	Y	W	N	P	P	T	L	N	G	V	L	M	K	L	S	V	G	Q	Y	L	A	K	D	K	G	A	T	I	D	V	A	K	R	F	D	S	G	V	A	V	G	V	W	A	A	I	S	N	V	S
Query Conservation										.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																												.	.	.
Template Conservation																																													.	.	.
Template Sequence		A	H	D	N	D	E	H	Y	M	R	D	L	T	F	R	E	K	T	S	G	S	R	Y	Y	G	T	V	I	N	A	G	Y	Y	V	T	P	N	A	K	V	F	A	E	.	.	.	F	T	Y	S	K	Y	D	E	G	K	G	G	T	Q	T	I	D	K	N	S	G	D	S	V	S	I	G	G	D	A	A	G	I	S
Template Known Secondary structure									G	G	G	T																									T	T							.	.	.																		T	T	T
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	D	Y	G	E	G	G	F	S	K	G	F	Y	I	S	I	P	F	D	L	M	T	I
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.
Template Sequence		N	K	.	.	.	.	.	.	.	.	.	N	Y	T	V	T	A	G	L	Q	Y	R	F	G
Template Known Secondary structure				.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Template SS confidence
		279	280										.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions