Job Description P75882 Confidence 26.04% Date Thu Jan 5 12:15:23 GMT 2012 Rank 17 Aligned Residues 156 % Identity 13% Template c2f1tB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw Resolution 3.00 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		G	G	T	G	L	L	Q	M	P	N	A	R	I	A	P	E	G	E	F	S	V	N	Y	R	D	N	D	Q	Y	R	F	Y	S	T	S	V	A	L	F	P	W	L	E	G	T	I	R	Y	T	D	V	.	R	T	R	K	Y	S	Q	W	E	D	F	S	G	D	Q	S	Y	K	D	K	S	F	D	F	K	L	R	L
Query Conservation																																																					.
Alig confidence																								.	.	.	.	.	.	.	.	.																					.
Template Conservation																								.	.	.	.	.	.	.	.	.
Template Sequence		G	S	A	T	V	R	P	T	E	G	G	G	F	S	V	T	N	N	T	Q	L	G	.	.	.	.	.	.	.	.	.	L	T	F	T	Y	M	A	T	D	N	I	G	V	E	L	L	A	A	T	P	F	R	H	K	I	G	T	R	A	T	G	D	I	A	T	V	H	H	L	P	P	T	L	M	A	Q	W	Y	F
Template Known Secondary structure																								.	.	.	.	.	.	.	.	.									T	T									S									T	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.										.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
			117	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure		.															.	.	.	.	.
Query SS confidence		.															.	.	.	.	.
Query Sequence		.	W	E	E	G	Y	W	L	P	Q	V	A	F	G	K	.	.	.	.	.	R	D	I	A	G	T	G	L	F	D	G	E	Y	L	V	A	S	K	Q	A	G	P	F	D	F	T	L	G	M	A	W	G	Y	A	G	N	A	G	N	I	T	N	P	F	C	R	V	S	D	K	Y	C	H	R	A	E	S	H	D	A
Query Conservation		.															.	.	.	.	.
Alig confidence		.															.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	A	S	S	K	F	R	P	Y	V	G	A	G	I	N	Y	T	T	F	F	D	N	G	F	N	D	H	G	K	E	A	G	L	S	D	L	S	L	K	D	S	W	G	A	A	G	Q	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S		T	T		S																										T	T																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.											.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	I	S	F	S	D	I	F	R	G	P	A	S	I	F	G	G	I	E	Y	Q	T	P	W	N	P	L	R	L	K	L	E	Y	D	G	N	N	Y	Q	N	D	F	A	G	K	L	P	.	.	.	.	.	.	.	.	.	.	Q	A	S	H	F	N	V	G	A	V	Y	R	A
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																								.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	Y	L	I	N	.	R	D	W	L	V	N	M	S	V	W	Y	M	D	I	D	T	T	A	N	Y	K	L	G	G	A	Q	Q	H	D	S	V	R	L	D	P	W	V	F	M	F	S	A	G	Y	R	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	.	S	S																					S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template SS confidence
																				140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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