Job Description P75882 Confidence 4.26% Date Thu Jan 5 12:15:23 GMT 2012 Rank 68 Aligned Residues 66 % Identity 14% Template c1uv7A_ PDB info PDB header:transport Chain: A: PDB Molecule:general secretion pathway protein m; PDBTitle: periplasmic domain of epsm from vibrio cholerae Resolution 1.7 Å

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		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	N	Q	L	T	A	L	K	Y	N	A	G	F	D	A	P	E	I	Q	L	R	D	K	T	L	Y	M	S	G	Q	Q	Y	K	Y	R	D	S	R	E	A	V	D	R	A	N	R	I	L	V	N	N	L	P	Q	G	V	E	K	I	S	V	T	Q	K	R	E	H	M	A	M	V	T	T	E
Query Conservation
Alig confidence																																					.	.	.	.																										.	.	.	.	.
Template Conservation																																					.	.	.	.																										.	.	.	.	.
Template Sequence		L	N	Q	V	I	T	N	S	T	R	Q	F	N	I	E	L	I	R	V	Q	P	R	G	E	X	X	Q	V	W	I	Q	P	L	P	F	.	.	.	.	S	Q	L	V	S	W	I	A	Y	L	Q	E	R	Q	G	V	S	V	D	A	I	D	I	D	R	.	.	.	.	.	G	V	V	E	V	K
Template Known Secondary structure														T										S	S									B			.	.	.	.														S												.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.																										.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions