|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | K | L | T | I | G | L | I | G | N | P | N | S | G | K | T | T | L | F | N | Q | L | T | G | S | R | Q | R | V | G | N | W | A | G | V | T | V | E | R | K | E | G | Q | F | S | T | T | D | H | Q | V | T | L | V | D | L | P | G | T | Y | S | L | T | T | I | S | S | Q | T | S | L | D | E | Q | I | A | C | H | Y | I |
Query Conservation |   |
|   |
|   |
|
|
|
|
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|
|
|   |
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |
|
|
|
|   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | I | F | K | I | I | V | I | G | D | S | N | V | G | K | T | C | L | T | Y | R | F | C | A | G | R | F | P | D | R | T | E | A | T | I | G | V | D | F | R | E | R | A | V | D | I | D | G | E | R | I | K | I | Q | L | W | D | T | A | G | Q | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | F | R | K | S | M | V | Q | H |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  |  | S | S |
|
| S | S |
|
|
|
|
| S |
|
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
|
|
| S |  | . | . | . | . | . | . | . | . | . |  |  |  | T | T | T |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 100 | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | |
. | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | S | G | D | A | D | L | L | I | N | V | V | D | A | S | N | L | E | R | N | L | Y | L | T | L | Q | L | L | E | L | . |
. |
. |
. |
. |
. |
. |
G | I | P | C | I | V | A | L | N | M | L | D | I | A | E | K | Q | N | I | R | I | E | . |
I | D | A | L | S | A | R | L | G | C | P | V | I | P | L | V | S | T | R | G |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|
|   |
|
| . | . | . | . | . | . | . |
|   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|   |   |
|
| . |   |   |   |
|
|   |   |
|
|   |
|
|
|   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
Template Sequence |   |
Y | Y | R | N | V | H | A | V | V | F | V | Y | D | M | T | N | M | A | S | F | H | S | L | P | A | W | I | E | E | C | K | Q | H | L | L | A | N | D | I | P | R | I | L | V | G | N | K | C | D | L | R | S | A | I | Q | V | P | T | D | L | A | Q | K | F | A | D | T | H | S | M | P | L | F | E | T | S | A | K | N | P |
Template Known Secondary structure |   |
 |  | T | T |
|
|  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |
|
|
| S |
|
|
|  |  |  |  |  |  |
| T | T |
| G | G | G |
|
| S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
|
| S | S | S | G |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
  |
  |   |
154 | |
|
|
. | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
| . | . | . |
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
| . |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | . |
. |
. |
G | I | E | A | L | K | L | A | I |
Query Conservation |   |
  | . | . | . |
|
|   |
|
|   |   |   |
|
Alig confidence |   |
| . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |
|
Template Sequence |   |
N | D | N | D | H | V | E | A | I | F | M | T | L |
Template Known Secondary structure |   |
G | G | G | S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . |
  |