|   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | L | I | G | N | P | N | S | G | K | T | T | L | F | N | Q | L | T | G | S | R | Q | R | V | G | N | W | A | G | V | T | V | E | R | K | E | G | Q | F | S | T | T | D | H | Q | V | T | L | V | D | L | P | G | T | Y | S | L | T | T | I | S | S | Q | T | S | L | D | E | Q | I | A | C | H | Y | I | L | S | G | D |
Query Conservation |   |
|
|
|
|
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|
|
|   |
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|
|   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|
|
|
|
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
|   |   |   |
Template Sequence |   |
I | E | I | Y | G | P | E | S | S | G | K | T | T | V | A | L | H | A | V | A | N | A | Q | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | G | G | I | A | A | F | I | D | A | E | H | A | L | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | E | Y | A | K | K | L | G | V | D | T | D | S |
Template Known Secondary structure |   |
 |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | S |
|  |  |  |  |  |
| S | S |
|
|
|
| . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | T |
|
| G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . |
  |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | L | L | I | N | V | V | D | A | S | N | L | E | R | N | L | Y | L | T | L | Q | L | L | E | L | G | I | P | C | I | V | A | L | N | M | L | D | I | A | E | K | Q | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | R | I | E | I | D | A | L | S | A | R | L | G | C | P | V | I | P | L | V | S | T | R | G |
Query Conservation |   |
  |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |   |
|
|   |   |
|
|   |
|
|
|   |
|
|
|   |   |
|
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |
Template Sequence |   |
. |
. |
. |
. |
L | L | V | S | Q | P | D | T | G | E | Q | A | L | E | I | A | D | M | L | V | R | S | G | A | L | D | I | I | V | I | D | S | V | A | A | L | V | P | R | A | E | I | E | G | L | Q | A | R | L | M | S | Q | A | L | R | K | M | T | G | A | L | N | N | S | G | T | T | A | I | F | I | N | Q | T | G | G |
Template Known Secondary structure |   |
. | . | . | . |
|  |  |  |
|
| S | S |  |  |  |  |  |  |  | T |  |  |  |  |  | T | S |
|  |  |  |  |  |  | S |
| S | T | T |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
Template Predicted Secondary structure |   |
. | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
  |
  |   |
154 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
R | G | I | E | A |
Query Conservation |   |
  |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
Template Sequence |   |
K | A | L | K | F |
Template Known Secondary structure |   |
T | T |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
  |   |
215 | . | . | . | . |
  |