Return to main results Retrieve Phyre Job Id

Job DescriptionP33650
Confidence99.47%DateThu Jan 5 11:52:32 GMT 2012
Rank36Aligned Residues167
% Identity16%Templatec3p1jC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of human gtpase imap family member 2 in the2 nucleotide-free state
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  KLTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYIL
Query Conservation   
 




 

 










    


 





 
 
        
 









       
 

 


  
 
Alig confidence 



























...............






















.












Template Conservation   


 
 
    




 
 
 
     ...............        






        .     
       
Template Sequence  ELRIILVGKTGTGKSAAGNSILRTCSKS. . . . . . . . . . . . . . . QGSWREIVIIDTPDMFSWKDHCE. ALYKEVQRCYLLS
Template Known Secondary structure 

TTS



...............



GGGGSS


.
Template Predicted Secondary structure 









...............













.
Template SS confidence 















































































   22.......30.........40......... 50.........60.........70.. .......80.....
 
   83......90.........100......... 110.........120.........130... ......140........
Predicted Secondary structure 








......













.....



...
Query SS confidence 


























. . . . . .























. . . . .














. . .
Query Sequence  SGDADLLINVVDASNLERNLYLTLQLL. . . . . . ELGIPCIVALNMLDIAEKQNIRIE. . . . . IDALSARLGCPVIPL. . .
Query Conservation      



 








 
 
  

 ......


 







 
 
   
  

.....   

  

 


 
...
Alig confidence 


























......























.....














...
Template Conservation       


 
      
         
            


 

 
               
         
   
   
Template Sequence  APGPHVLLLVTQLGRYTSQDQQAAQRVKEIFGEDAMGHTIVLFTHKNGGSLMDYMHDSDNKALSKLVAACGGRICAFNNR
Template Known Secondary structure  TT

STTB


GGGGGG




TTT
TT
Template Predicted Secondary structure 























Template SS confidence 















































































   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   149150.........160.........170.........180.......
Predicted Secondary structure  ..
















Query SS confidence  . .






































Query Sequence  . . VSTRGRGIEALKLAIDRYKANENVELVHYAQPLLNEADS
Query Conservation  ..

  
 

 

   
                  
  
  
Alig confidence  ..























..












Template Conservation           
 



 
     
   ..           
 
Template Sequence  AEGSNQDDQVKELMDCIEDLLMEKNG. . DHYTNGLYSLIQR
Template Known Secondary structure 

TTTT..




Template Predicted Secondary structure 







..



Template SS confidence 








































   186...190.........200.........210. ........220....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions