Job Description P33650 Confidence 99.48% Date Thu Jan 5 11:52:32 GMT 2012 Rank 34 Aligned Residues 227 % Identity 19% Template c3md0A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:arginine/ornithine transport system atpase; PDBTitle: crystal structure of arginine/ornithine transport system2 atpase from mycobacterium tuberculosis bound to gdp (a ras-3 like gtpase superfamily protein) Resolution 2.45 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		K	K	L	T	I	G	L	I	G	N	P	N	S	G	K	T	T	L	F	N	Q	L	T	G	S	R	Q	R	V	G	N	W	A	G	V	T	V	E	R	K	E	G	Q	F	S	T	T	D	H	Q	V	T	L	V	D	L	P	G	T	Y	S	L	T	T	I	S	S	Q	T	S	L	D	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	A	H	R	V	G	I	T	G	V	P	G	V	G	K	S	T	A	I	E	A	L	G	M	H	L	I	E	R	G	H	R	V	A	V	L	A	V	R	M	A	R	L	A	V	H	P	N	A	Y	I	R	P	S	T	L	G	G	V	T	R	A	T	R	E	T	V	V	L	L	E	A	A	G	F	D	V	I	L	I
Template Known Secondary structure			S									T	T	S	S														T	T	T															T	S	T	T																									T	T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.											.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	I	A	C	H	Y	I	L	S	G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	E	R	N	L	Y	L	T	L	Q	L	L	E	L	G	I	P	C	I	V	A	L	N	M	L	D	I	A	E	K	Q	N	I	R	I	E	I	D	A	L	S	A	R	L	.	.	.	.	.	.	.	.	.	.	G	C
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.
Template Sequence		E	T	G	Q	S	E	V	A	V	A	N	M	V	D	T	F	V	L	L	T	L	A	R	T	G	D	Q	L	Q	G	I	.	.	K	K	G	V	L	E	L	A	D	I	V	V	V	N	K	A	D	G	E	H	H	K	E	A	R	L	A	A	R	E	L	S	A	A	I	R	L	I	Y	P	R	E	A	L	W	R	P
Template Known Secondary structure												T	T		S								S		T	T	T	T	T	T	T		.	.		T	T	G	G	G	G		S									G	G	G																			S	T	T		S	S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	I	P	L	V	S	T	R	G	R	G	I	E	A	L	K	L	A	I	D	R	Y	K	A	N	E	N	V	E	L	V	H	Y	A	Q	P	L	L	N	E	A	D	S	L	A	K	V	M	P	S	D	I	P	L	K	Q	R	R	W	L	G	L	Q	M	L	E	G	D	I	Y	S	R	A	Y	A	G	E	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	L	T	M	S	A	V	E	G	R	G	L	A	E	L	W	D	T	V	E	R	H	R	Q	V	L	T	G	A	G	E	F	D	A	R	R	R	D	Q	Q	V	D	W	T	W	Q	L	V	R	D	A	V	L	D	R	V	W	S	N	P	T	V	R	K	V	R	S	E	L	E	R	R	V	R	A	G	E	L	T
Template Known Secondary structure							B	T	T	T	T	B	S																		T	T																												T																	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		224	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	L	D	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	L	A	A	Q	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions