Job Description P33650 Confidence 97.99% Date Thu Jan 5 11:52:32 GMT 2012 Rank 264 Aligned Residues 152 % Identity 15% Template c3l2oB_ PDB info PDB header:protein binding/cell cycle Chain: B: PDB Molecule:f-box only protein 4; PDBTitle: structure-based mechanism of dimerization-dependent ubiquitination by2 the scffbx4 ubiquitin ligase Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure													.												.							.																			.	.	.									.	.	.
Query SS confidence													.												.							.																			.	.	.									.	.	.
Query Sequence		K	K	L	T	I	G	L	I	G	N	P	.	N	S	G	K	T	T	L	F	N	Q	L	.	T	G	S	R	Q	R	.	V	G	N	W	A	G	V	T	V	E	R	K	E	G	Q	F	S	T	.	.	.	T	D	H	Q	V	T	L	V	.	.	.	D	L	P	G	T	Y	S	L	T	T	I	S	S	Q	T	S	L
Query Conservation													.												.							.																			.	.	.									.	.	.
Alig confidence													.												.							.																			.	.	.									.	.	.											.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		N	E	P	R	F	A	M	F	G	P	G	L	E	E	L	N	T	S	L	V	L	S	L	M	S	S	E	E	L	C	P	T	A	G	L	P	Q	R	Q	I	D	G	I	G	S	G	V	N	F	Q	L	N	N	Q	H	K	F	N	I	L	I	L	Y	S	T	T	R	R	Y	S	V	I	P	.	.	.	.	.	.	.
Template Known Secondary structure											T					S	S	S							T	T		G	G	G							S	T	T	T		S	S	S									T	T	T									S											.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																														.	.	.	.	.	.											.	.	.	.											.
Query SS confidence																														.	.	.	.	.	.											.	.	.	.											.
Query Sequence		D	E	Q	I	A	C	H	Y	I	L	S	G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	E	R	.	.	.	.	.	.	N	L	Y	L	T	L	Q	L	L	E	.	.	.	.	L	G	I	P	C	I	V	A	L	N	.	M	L	D	I	A	E	K	Q	N	I	R	I	E	I	D	A	L	S	A	R	L
Query Conservation																														.	.	.	.	.	.											.	.	.	.											.
Alig confidence		.	.	.							.	.																		.	.	.	.	.	.											.	.	.	.											.							.	.	.	.
Template Conservation		.	.	.							.	.																																																							.	.	.	.
Template Sequence		.	.	.	Q	I	Q	K	V	C	.	.	E	V	V	D	G	F	I	Y	V	A	N	A	E	A	H	K	R	H	E	W	Q	D	E	F	S	H	I	M	A	M	T	D	P	A	F	G	S	S	G	R	P	L	L	V	L	S	C	I	S	Q	G	D	V	K	.	.	.	.	R	M	P	C	F	Y	L	A	H	E	L
Template Known Secondary structure		.	.	.							.	.				S							B		B	T	T																							T	T										S	S	T	T	S		.	.	.	.	B										T
Template Predicted Secondary structure		.	.	.							.	.																																																							.	.	.	.
Template SS confidence
					278	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.					.	.	340	.	.	.	.	.	.	.	.
		142	.	.								.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.
Query Sequence		G	C	P	.	.	.	.	.	.	.	V	I	P	L	V	S	T	R	G	R	G	I	E	A	L	K	L	A	I	D	R	Y	K	A	N
Query Conservation					.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	L	N	L	L	N	H	P	W	L	V	Q	D	T	E	A	E	T	L	T	G	F	L	N	G	I	E	W	I	L	E	E	V	E	S
Template Known Secondary structure		T	G	G	G	G		S									T	T	T		T	T												S
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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