 |
Job Description | P33650 | Confidence | 98.14% | Date | Thu Jan 5 11:52:32 GMT 2012 |
Rank | 256 | Aligned Residues | 73 |
% Identity | 16% | Template | c3h2yA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:gtpase family protein; |
PDBTitle: crystal structure of yqeh gtpase from bacillus anthracis with dgdp2 bound
|
Resolution | 1.80 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | K | L | T | I | G | L | I | G | N | P | N | S | G | K | T | T | L | F | N | Q | L | T | G | S | R | . |
Q | R | V | G | N | W | A | G | V | T | V | E | R | K | E | G | Q | F | S | T | T | D | H | Q | V | T | L | V | D | L | P | G | T | Y | S | L | T | T | I | S | S | Q | T | S | L | D | E | Q |
Query Conservation |   |
|   |
|   |
|
|
|
|
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |   | . |   |   |
|
|
|   |
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |
|   | . |   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
G | G | K | D | V | Y | V | V | G | C | T | N | V | G | K | S | T | F | I | N | R | X | I | K | E | F | S | D | E | T | E | N | V | I | T | T | S | H | F | P | D | L | I | D | I | P | L | D | . |
E | E | S | S | L | Y | D | T | P | G | I | I | N | H | H | Q | X | A | H | Y | V | G | K | Q | S | L |
Template Known Secondary structure |   |
T | T | S |
|  |  |  |  |  | B | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| S | S |
|
|  |  |  |
|
|
|
|  |  |  |  |  | S | S | . | S | S |
|  |  |  |  |
|
|
| B |
|
| T | T | S | G | G | G | G | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | |
. | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|