Job Description P33650 Confidence 98.58% Date Thu Jan 5 11:52:32 GMT 2012 Rank 245 Aligned Residues 137 % Identity 20% Template c2zejA_ PDB info PDB header:transferase Chain: A: PDB Molecule:leucine-rich repeat kinase 2; PDBTitle: structure of the roc domain from the parkinson's disease-associated2 leucine-rich repeat kinase 2 reveals a dimeric gtpase Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	G	L	I	G	N	P	N	S	G	K	T	T	L	F	N	Q	L	T	G	S	R	Q	R	V	G	N	W	A	G	V	T	V	E	R	K	E	G	Q	F	S	T	T	D	H	Q	V	T	L	V	D	L	P	G	T	Y	S	L	T	T	I	S	S	Q	T	S	L	D	E	Q	I	A	C	H	Y	I	L	S	G
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.														.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.														.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	X	I	V	G	N	T	G	S	G	K	T	T	L	L	Q	Q	L	.	.	.	.	.	.	.	.	.	X	K	T	V	G	I	D	V	K	D	W	P	I	.	.	.	.	L	V	L	N	V	W	D	F	A	G	R	E	E	F	Y	S	T	H	P	H	F	X	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Known Secondary structure							S		T	T	S	S									.	.	.	.	.	.	.	.	.	T				S									.	.	.	.										S						T	T	S					.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.														.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1336	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.										.	.	.	.	.	1360	.	.	.	.	.	.	.					.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.													1390
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.							.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.		.	.	.	150	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.																															.	.	.	.						.
Query SS confidence																													.	.	.	.	.	.																															.	.	.	.						.
Query Sequence		D	A	D	L	L	I	N	V	V	D	A	S	N	L	E	R	N	L	Y	L	T	L	Q	L	L	E	L	.	.	.	.	.	.	G	I	P	C	I	V	A	L	N	M	L	D	I	A	E	K	Q	N	I	R	I	E	I	D	A	L	S	A	R	L	.	.	.	.	G	C	P	V	I	.	P	L	V	S	T	R	G
Query Conservation																													.	.	.	.	.	.																															.	.	.	.						.
Alig confidence																													.	.	.	.	.	.																															.	.	.	.						.
Template Conservation
Template Sequence		Q	R	A	L	Y	L	A	V	Y	D	L	S	K	G	Q	A	E	V	D	A	X	K	P	W	L	F	N	I	K	A	R	A	S	S	S	P	V	I	L	V	G	T	H	L	D	V	S	D	E	K	Q	R	K	A	C	X	S	K	I	T	K	E	L	L	N	K	R	G	F	P	A	I	R	D	Y	H	F	V	N	A
Template Known Secondary structure			S									G	G	G							T													T	T										G	G	G																	T	T	T		T	T	S											T
Template Predicted Secondary structure
Template SS confidence
		1411	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490
		154	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	I	E	A	L	K	L	A	I	D	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	E	S	D	A	L	A	K	L	R	K	T
Template Known Secondary structure		T	S
Template Predicted Secondary structure
Template SS confidence
		1491	.	.	.	.	.	.	.	.	1500	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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