Job Description P33650 Confidence 97.71% Date Thu Jan 5 11:52:32 GMT 2012 Rank 281 Aligned Residues 114 % Identity 17% Template c2yc2D_ PDB info PDB header:transport protein Chain: D: PDB Molecule:small rab-related gtpase; PDBTitle: intraflagellar transport complex 25-27 from chlamydomonas Resolution 2.59 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		G	V	T	V	E	R	K	E	G	Q	F	S	T	T	D	.	.	.	.	H	Q	V	T	L	V	D	L	P	G	T	Y	S	L	T	T	I	S	S	Q	T	S	L	D	E	Q	I	A	C	H	Y	I	L	S	G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	E	R	N	L	Y	L	T	L	Q	L	L	E
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	C	K	V	A	V	V	V	A	P	V	T	I	P	D	T	T	V	S	V	E	L	F	L	L	D	T	A	G	S	.	.	.	.	.	.	.	.	.	.	.	.	D	L	Y	K	E	Q	I	S	Q	Y	W	N	G	V	Y	Y	A	I	L	V	F	D	V	S	S	M	E	S	F	E	S	C	K	A	W	F	E	L
Template Known Secondary structure															T	T	S	S										T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.								S	T	T													T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.													.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		111	.										.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.																																										.	.
Query SS confidence				.	.	.	.	.	.	.	.	.																																										.	.
Query Sequence		L	G	.	.	.	.	.	.	.	.	.	I	P	C	I	V	A	L	N	M	L	D	I	A	E	K	Q	N	I	R	I	E	I	D	A	L	S	A	R	L	G	C	P	V	I	P	L	V	S	T	R	G	.	.	R	G	I	E	A	L	K	L	A	I	D	R
Query Conservation				.	.	.	.	.	.	.	.	.																																										.	.
Alig confidence				.	.	.	.	.	.	.	.	.												.	.	.	.	.																										.	.
Template Conservation																								.	.	.	.	.
Template Sequence		L	K	S	A	R	P	D	R	E	R	P	L	R	A	V	L	V	A	N	K	T	Q	.	.	.	.	.	V	R	L	D	M	A	Q	D	W	A	T	T	N	T	L	D	F	F	D	V	S	A	A	D	A	P	F	L	S	I	A	T	T	F	Y	R	N	Y	E
Template Known Secondary structure							S		T	T	S													.	.	.	.	.														T
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.						140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions