Job Description P33650 Confidence 99.61% Date Thu Jan 5 11:52:32 GMT 2012 Rank 22 Aligned Residues 191 % Identity 15% Template c2xtpA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of nucleotide-free human gimap2, amino2 acid residues 1-260 Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																													.						.
Query SS confidence																													.						.
Query Sequence		K	L	T	I	G	L	I	G	N	P	N	S	G	K	T	T	L	F	N	Q	L	T	G	S	R	Q	R	.	V	G	N	W	A	.	G	V	T	V	E	R	K	E	G	Q	F	S	T	T	D	H	Q	V	T	L	V	D	L	P	G	T	Y	S	L	T	T	I	S	S	Q	T	S	L	D	E	Q	I	A	C	H	Y
Query Conservation																													.						.
Alig confidence																													.						.																																			.
Template Conservation																																																																						.
Template Sequence		E	L	R	I	I	L	V	G	K	T	G	T	G	K	S	A	A	G	N	S	I	L	R	K	Q	A	F	E	S	K	L	G	S	Q	T	L	T	K	T	C	S	K	S	Q	G	S	W	G	N	R	E	I	V	I	I	D	T	P	D	X	F	S	W	K	D	H	C	E	.	A	L	Y	K	E	V	Q	R	C	Y	L
Template Known Secondary structure											T	T	S											T	S			S				T	T	S						S									T	T										G	G	G	G	S	S					.
Template Predicted Secondary structure																																																																						.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130									.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																				.														.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence																				.														.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		I	L	S	G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	.	E	R	N	L	Y	L	T	L	Q	L	L	E	L	.	.	.	.	.	G	I	P	C	I	V	A	L	N	M	L	D	I	A	E	K	Q	N	I	.	.	.	.	.	.	.	.	R	I	E	I	D	A	L	S	A	R	L	G	C	P	V	I
Query Conservation																				.														.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence																				.														.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	A	P	G	P	H	V	L	L	L	V	T	Q	L	G	R	Y	T	S	Q	D	Q	Q	A	A	Q	R	V	K	E	I	F	G	E	D	A	X	G	H	T	I	V	L	F	T	H	K	E	D	L	N	G	G	S	L	X	D	Y	X	H	D	S	D	N	K	A	L	S	K	L	V	A	A	C	G	G	R	I	C
Template Known Secondary structure				T	T			S								T	T																			G	G	G	G	G	G								G	G	G	G	T	T																						T	T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
							147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																	.	.
Query SS confidence		.	.	.	.	.																																	.	.
Query Sequence		.	.	.	.	.	P	L	V	S	T	R	G	R	G	I	E	A	L	K	L	A	I	D	R	Y	K	A	N	E	N	V	E	L	V	H	Y	A	.	.	Q	P	L	L	N	E	A	D	S	L	A	K	V	M	P	S
Query Conservation		.	.	.	.	.																																	.	.
Alig confidence		.	.	.	.	.																																	.	.
Template Conservation
Template Sequence		A	F	N	N	R	A	E	G	S	N	Q	D	D	Q	V	K	E	L	X	D	C	I	E	D	L	L	X	E	K	N	G	D	H	Y	T	N	G	L	Y	S	L	I	V	K	E	F	K	Q	S	L	I	K	Y	X	E
Template Known Secondary structure					T	T																								T	T	T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions