Job Description P33650 Confidence 99.11% Date Thu Jan 5 11:52:32 GMT 2012 Rank 110 Aligned Residues 153 % Identity 14% Template c2rexD_ PDB info PDB header:signaling protein/lipoprotein Chain: D: PDB Molecule:rho-related gtp-binding protein rho6; PDBTitle: crystal structure of the effector domain of plxnb1 bound with rnd12 gtpase Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		K	L	T	I	G	L	I	G	N	P	N	S	G	K	T	T	L	F	N	Q	L	T	G	S	R	Q	R	V	G	N	W	A	G	V	T	V	E	R	K	E	G	Q	F	S	T	T	D	H	.	Q	V	T	L	V	D	L	P	G	T	Y	S	L	T	T	I	S	S	Q	T	S	L	D	E	Q	I	A	C	H	Y	I
Query Conservation																																																		.
Alig confidence																																																		.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	C	K	L	V	L	V	G	D	V	Q	C	G	K	T	A	M	L	Q	V	L	A	K	D	C	Y	P	E	T	Y	V	P	T	V	F	E	N	Y	T	A	C	L	E	T	E	E	Q	R	V	E	L	S	L	W	D	T	S	G	S	P	Y	Y	D	N	V	R	P	L	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	T	T	S	S											S					S					S											S	S													S	G	G	G	T	T	T	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.														.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																			.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	.	.	.	.	E	R	N	L	Y	L	T	L	Q	L	L	E	L	G	I	P	C	I	V	A	L	N	M	L	D	I	A	E	K	Q	N	I	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	D	A	L	S	A	R	L	G	C	P
Query Conservation																			.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	Y	S	D	S	D	A	V	L	L	C	F	D	I	S	R	P	E	T	V	A	L	K	K	W	R	T	E	I	L	D	Y	C	P	S	T	R	V	L	L	I	G	C	K	T	D	L	R	T	D	L	S	T	L	M	E	L	S	H	Q	K	Q	A	P	I	S	Y	E	Q	G	C	A	I	A	K	Q	L	G	A	E
Template Known Secondary structure		G	G	T	T		S								T	T		T	T	T															T	T	S									G	G	G	G	G											T	T																T	T		S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
			145	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure		.											.
Query SS confidence		.											.
Query Sequence		.	V	I	P	L	V	S	T	R	G	R	.	G	I	E	A	L	K	L	A	I	D	R	Y	K
Query Conservation		.											.
Alig confidence		.											.
Template Conservation
Template Sequence		I	Y	L	E	G	S	A	F	T	S	E	K	S	I	H	S	I	F	R	T	A	S	M	L	C
Template Known Secondary structure								T	T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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