Job Description P33650 Confidence 99.48% Date Thu Jan 5 11:52:32 GMT 2012 Rank 35 Aligned Residues 164 % Identity 23% Template c2plfA_ PDB info PDB header:translation Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit; PDBTitle: the structure of aif2gamma subunit from the archaeon2 sulfolobus solfataricus in the nucleotide-free form. Resolution 2.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																													.	.	50	.
Predicted Secondary structure																																.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	T	I	G	L	I	G	N	P	N	S	G	K	T	T	L	F	N	Q	L	T	G	S	R	Q	R	V	G	N	.	.	.	W	A	G	V	T	V	E	R	K	E	G	Q	F	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	H	Q
Query Conservation																																.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	N	I	G	V	V	G	H	V	D	H	G	K	T	T	L	V	Q	A	I	T	G	I	W	T	S	K	H	S	E	E	L	K	R	G	M	T	I	K	L	G	Y	A	E	T	N	I	G	V	C	E	S	C	K	K	P	E	A	Y	V	T	E	P	S	C	K	S	C	G	S	D	D	E	P	K	F	L	R	R
Template Known Secondary structure										S	S	T	T	S	S	S	T	T						S	S		S	T	T		T	T	T	T	T	T				S	S												T	T	S		T	T	T	T			S	S	S			G	G	G	T			S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.															.
Query SS confidence																																																		.	.	.															.
Query Sequence		V	T	L	V	D	L	P	G	T	Y	S	L	T	T	I	S	S	Q	T	S	L	D	E	Q	I	A	C	H	Y	I	L	S	G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	E	.	.	.	R	N	L	Y	L	T	L	Q	L	L	E	L	G	I	.	P	C	I	V	A	L	N	M	L	D	I	A	E	K
Query Conservation																																																		.	.	.															.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.															.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	F	I	D	A	P	G	H	E	V	L	M	A	T	M	L	S	G	A	.	.	.	.	.	.	.	.	.	.	.	.	A	L	M	D	G	A	I	L	V	V	A	A	N	E	P	F	P	Q	P	Q	T	R	E	H	F	V	A	L	G	I	I	G	V	K	N	L	I	I	V	Q	N	K	V	D	V	V	S	K
Template Known Secondary structure									S	S				S	S	S					T	.	.	.	.	.	.	.	.	.	.	.	.	T	S		S								T	T	S		S	S														T	T			S								G	G	G	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.													.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.							.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		Q	N	I	R	I	E	I	D	A	L	S	A	R	L	.	.	.	.	.	.	G	C	P	V	I	P	L	V	S	T	R	G	R	G	I	E	A	L	K	L	A	I	D	R	Y	K	A	N	E	N	V	E	L	V	H	Y	A
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	A	L	S	Q	Y	R	Q	I	K	Q	F	T	K	G	T	W	A	E	N	V	P	I	I	P	V	S	A	L	H	K	I	N	I	D	S	L	I	E	G	I	E	E	Y	I	K	T	P	Y	R	D	L	S	Q	K	P
Template Known Secondary structure													T	T	S	T	T	S	G	G	G	G							B	T	T	T	T	B	S												S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions