Job Description P33650 Confidence 98.85% Date Thu Jan 5 11:52:32 GMT 2012 Rank 217 Aligned Residues 150 % Identity 19% Template c2p5sB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:ras and ef-hand domain containing; PDBTitle: rab domain of human rasef in complex with gdp Resolution 2.15 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	I	G	L	I	G	N	P	N	S	G	K	T	T	L	F	N	Q	L	T	G	S	R	Q	R	V	G	N	W	A	G	V	T	V	E	R	K	E	G	Q	F	S	T	T	D	H	Q	V	T	L	V	D	L	P	G	T	Y	S	L	T	T	I	S	S	Q	T	S	L	D	E	Q	I	A	C	H	Y	I	L	S
Query Conservation
Alig confidence																										.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	K	I	V	L	A	G	D	A	A	V	G	K	S	S	F	L	M	R	L	C	K	N	E	.	.	.	.	.	F	R	G	V	D	F	Q	M	K	T	L	I	V	D	G	E	R	T	V	L	Q	L	W	D	T	A	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	E	R	F	R	S	I	A	K	S	Y	F
Template Known Secondary structure								S	S	T	T	S	S											S		.	.	.	.	.														T	T											T	T		.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																										.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.						.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.													.	.	.	.	.	.	600	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.								.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																	.	.	.																												.	.	.	.	.	.	.
Query SS confidence																	.	.	.																												.	.	.	.	.	.	.
Query Sequence		G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	.	.	.	E	R	N	L	Y	L	T	L	Q	L	L	E	L	G	I	P	C	I	V	A	L	N	M	L	D	I	A	.	.	.	.	.	.	.	E	K	Q	N	I	R	I	E	I	D	A	L	S	A	R	L	G	C	P	V	I	P	L	V	S	T	R	G
Query Conservation																	.	.	.																												.	.	.	.	.	.	.
Alig confidence																	.	.	.																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	A	D	G	V	L	L	L	Y	D	V	T	C	E	K	S	F	L	N	I	R	E	W	V	D	M	I	E	D	A	A	V	P	I	M	L	V	G	N	K	A	D	I	R	D	T	A	A	T	E	G	Q	K	C	V	P	G	H	F	G	E	K	L	A	M	T	Y	G	A	L	F	C	E	T	S	A	K	D	G
Template Known Secondary structure					S								T	T							T																						G	G	G							T	T																	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	I	E	A	L	K	L	A	I	D	R	Y	K	A	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	I	V	E	A	V	L	H	L	A	R	E	V	K	K	R
Template Known Secondary structure		T	T														T
Template Predicted Secondary structure
Template SS confidence
		695	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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