Job Description P33650 Confidence 99.32% Date Thu Jan 5 11:52:32 GMT 2012 Rank 66 Aligned Residues 255 % Identity 18% Template c2j69D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:bacterial dynamin-like protein; PDBTitle: bacterial dynamin-like protein bdlp Resolution 3.0 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.
Predicted Secondary structure																													.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	T	I	G	L	I	G	N	P	N	S	G	K	T	T	L	F	N	Q	L	T	G	S	R	Q	R	.	V	G	N	W	A	G	V	T	V	E	R	K	E	G	Q	F	S	T	T	D	H	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																													.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.										.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.
Template Sequence		V	F	R	L	L	V	L	G	D	M	K	R	G	K	S	T	F	L	N	A	L	I	G	E	N	L	L	P	S	D	V	N	P	C	T	A	V	.	.	.	L	T	V	L	R	Y	G	P	E	K	K	V	T	I	H	F	N	D	G	K	S	P	Q	Q	L	D	F	Q	N	F	K	Y	K	Y	T	I	D	P	A	E
Template Known Secondary structure											T	T	S											T	S	S		S					S	T	T	T			.	.	.								S	S								S	S	S															S
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
																																52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	L	V	D	L	P	G	T	Y	S	L	T	T	I	S	S	Q	T	S	L	D	E	Q	I	A	C	H	Y	I	L	S	G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	.	.	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.										.	.																.	.
Template Conservation																																														.	.	.	.	.	.	.										.	.
Template Sequence		A	K	K	L	E	Q	E	K	K	Q	A	F	P	D	V	D	Y	A	V	V	E	Y	P	L	T	L	L	Q	K	G	I	E	I	V	D	S	P	G	L	N	D	T	E	A	.	.	.	.	.	.	.	R	N	E	L	S	L	G	Y	V	.	.	N	N	C	H	A	I	L	F	V	M	R	A	S	Q	P	C	T	L
Template Known Secondary structure							T	S	S			S		T	T															T	T														T	.	.	.	.	.	.	.						T				.	.		S	S	S								T	T	S		S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.										.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.								190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.																								.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure													.																								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.																								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	L	Y	L	T	L	Q	L	L	E	.	L	G	I	P	C	I	V	A	L	N	M	L	D	I	A	E	K	Q	N	I	R	I	E	.	I	D	A	L	S	A	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	P	V	I	P	L	V	S	T	R	G	R
Query Conservation													.																								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		G	E	R	R	Y	L	E	N	Y	I	K	G	R	G	L	T	V	F	F	L	V	N	A	W	D	Q	V	R	E	S	L	I	D	P	D	D	V	E	E	L	Q	A	S	E	N	R	L	R	Q	V	F	N	A	N	L	A	E	Y	C	T	V	E	G	Q	N	I	Y	D	E	R	V	F	E	L	S	S	I	.	.	.
Template Known Secondary structure											T	T	T	S											G	G	G	G	G	G	G		S	S	T	T																					G	G	G	S	B	S	S	S		B		G	G	G	T								.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.												.	.	220	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	E	A	L	K	L	A	I	D	R	Y	K	A	N	E	N	V	E	L	V	H	Y	A	Q	P	L	L	N	E	A	D	S	L	A	K	V	M	P	S	D	I	P	L	K	Q	R	R	W	L	G	L	Q	M	L	E	G	D	I	Y	S	R	A	.	.	.	.	.	.	.	.	.	.	.	Y	A	G	E	A	S
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	Q	A	L	R	R	R	L	K	N	P	Q	A	D	L	D	G	T	G	F	P	K	F	M	D	S	L	N	T	F	L	T	R	E	R	A	I	A	E	L	R	Q	V	R	T	L	A	R	L	A	C	N	H	T	R	E	A	V	A	R	R	I	P	L	L	E	Q	D	V	N	E	L	K	K	R	I
Template Known Secondary structure		.	.	.	.	.										T	T				T	T	S	S															T																															S	S	S		S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	L	D	A	A	L	A	R	L	R	N	E	M	D	D	P	A	L	H	I	A	D	A	R	Y	Q	C	I	A	A	I	C	D	V	V	S	N	T	L	T	A	E	P	S	R	F	T	T	A	V	D	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	V	E	P	E	F	N	K	L	T	G	I	R	D	E	F	Q	K	E	I	I	N	T	R	D	T	Q	A	R	T	I	S	E	S	F	R	S	Y	V	L	N	L	G	N	T	F	E	N	D	F	L	R	Y
Template Known Secondary structure																																										T	T	T	T	T	T	T					T	T	T
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions