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Job DescriptionP33650
Confidence98.95%DateThu Jan 5 11:52:32 GMT 2012
Rank183Aligned Residues162
% Identity14%Templatec2hf9A_
PDB info PDB header:hydrolase, metal binding proteinChain: A: PDB Molecule:probable hydrogenase nickel incorporation PDBTitle: crystal structure of hypb from methanocaldococcus2 jannaschii in the triphosphate form
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20..... ....30.........40.........50.........60.........70.....
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Query Sequence  KKLTIGLIGNPNSGKTTLFNQLTG. . . . . . SRQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGTYSLTTISSQTSLDEQ
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Template Sequence  GVVAFDFMGAIGSGKTLLIEKLIDNLKDKYKIACIAGDVIAKFD. . AERMEKHGAKVVPLNTGKECHLDAH. . . . . . LVG
Template Known Secondary structure  T
STTSSTTT

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TT
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   32.......40.........50.........60.........70..... ....80.........90.........100 ...
 
   76...80.... .....90........ .100.........110.........120.........130...
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Query Sequence  IACHYILSG. . . . . . . . . . . . . . . . . . . . . DADLLINVVDASNL. ERNLYLTLQLLELGIPCIVALNMLDIAEKQNIRIE
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Template Sequence  HALEDLNLDEIDLLFIENVGNLICPADFDLGTHKRIVVISTTEGDDTIEKHPGIMKTADLIVINKIDLADAVGADIKKME
Template Known Secondary structure  TTS
GGG
S

S
SSGGGG


S
SGGG
TTTTTT
TT
S
GGGT

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   104.....110.........120.........130.........140.........150.........160.........170.........180...
 
   134.....140.........150.........160.........170.
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Query Sequence  IDALSARLGCPVIPLVSTRGRGIEALKLAIDRYKANEN
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Template Sequence  NDAKRINPDAEVVLLSLKTMEGFDKVLEFIEKSVKEVK
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   184.....190.........200.........210.........220.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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