Job Description P33650 Confidence 98.62% Date Thu Jan 5 11:52:32 GMT 2012 Rank 243 Aligned Residues 153 % Identity 14% Template c2fv8A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rho-related gtp-binding protein rhob; PDBTitle: the crystal structure of rhob in the gdp-bound state Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	K	L	T	I	G	L	I	G	N	P	N	S	G	K	T	T	L	F	N	Q	L	T	G	S	R	Q	R	V	G	N	W	A	G	V	T	V	E	R	K	E	G	Q	F	S	T	T	D	H	Q	V	T	L	V	D	L	P	G	T	Y	S	L	T	T	I	S	S	Q	T	S	L	D	E	Q	I	A	C	H	Y
Query Conservation
Alig confidence																														.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	I	R	K	K	L	V	V	V	G	D	G	A	C	G	K	T	C	L	L	I	V	F	S	K	D	E	F	.	.	.	.	.	.	P	F	E	N	Y	V	A	D	I	E	V	D	G	K	Q	V	E	L	A	L	W	D	T	A	G	Q	E	D	Y	D	R	L	R	P	L	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S											T	T	S	S											S	S		.	.	.	.	.	.												T	T											T	T		T	T		T	T	T	G	G	G	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.														.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																				.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	S	G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	.	.	.	.	.	.	E	R	N	L	Y	L	T	L	Q	L	L	E	L	G	I	P	C	I	V	A	L	N	M	L	D	I	A	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	I	R	I	E	I	D	A	L	S	A	R	L
Query Conservation																				.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																		.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	S	Y	P	D	T	D	V	I	L	M	C	F	S	V	D	S	P	D	S	L	E	N	I	P	E	K	W	V	P	E	V	K	H	F	C	P	N	V	P	I	I	L	V	A	N	K	K	D	L	R	S	D	E	H	V	R	T	E	L	A	R	M	K	Q	E	P	V	R	T	D	D	G	R	A	M	A	V	R	I
Template Known Secondary structure		.	G		T	T										T	T											T									S	T	T										G	G	G	G	G											T	T																T
Template Predicted Secondary structure		.
Template SS confidence
			73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		142		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		G	.	C	P	V	I	P	L	V	S	T	R	G	R	G	I	E	A	L	K	L	A	I	D	R	Y	K	A	N	E	N
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		Q	A	Y	D	Y	L	E	C	S	A	K	T	K	E	G	V	R	E	V	F	E	T	A	T	R	A	A	L	Q	K	R
Template Known Secondary structure		T		S							T	T	T		T	T														S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions