Job Description P33650 Confidence 98.92% Date Thu Jan 5 11:52:32 GMT 2012 Rank 195 Aligned Residues 157 % Identity 15% Template c2f7sA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ras-related protein rab-27b; PDBTitle: the crystal structure of human rab27b bound to gdp Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	I	G	L	I	G	N	P	N	S	G	K	T	T	L	F	N	Q	L	T	G	S	R	Q	R	V	G	N	W	A	G	V	T	V	E	R	K	E	G	Q	F	S	T	T	D	H	Q	V	T	L	V	D	L	P	G	T	Y	S	L	T	T	I	S	S	Q	T	S	L	D	E	Q	I	A	C	H	Y	I	L	S
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.
Template Sequence		I	K	L	L	A	L	G	D	S	G	V	G	K	T	T	F	L	Y	R	Y	T	D	N	K	F	N	P	K	F	I	T	T	V	G	I	D	F	R	E	K	R	V	V	Y	N	A	G	K	A	F	K	V	H	L	Q	L	W	D	T	A	G	Q	.	.	.	.	.	.	.	E	R	F	R	S	L	T	T	A	F	F
Template Known Secondary structure								S		T	T	S	S											S																																						S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.								.	.	.	.	.	.	.	.	80	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.								.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.																							.
Query SS confidence																														.	.	.	.	.	.	.																							.
Query Sequence		G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	E	R	N	L	Y	L	T	L	Q	L	L	E	L	.	.	.	.	.	.	.	G	I	P	C	I	V	A	L	N	M	L	D	I	A	E	K	Q	N	I	R	I	E	.	I	D	A	L	S	A	R	L	G	C	P	V	I	P	L	V	S	T	R	G	R	G
Query Conservation																														.	.	.	.	.	.	.																							.
Alig confidence																														.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		R	D	A	M	G	F	L	L	M	F	D	L	T	S	Q	Q	S	F	L	N	V	R	N	W	M	S	Q	L	Q	A	N	A	Y	C	E	N	P	D	I	V	L	I	G	N	K	A	D	L	P	D	Q	R	E	V	N	E	R	Q	A	R	E	L	A	D	K	Y	G	I	P	Y	F	E	T	S	A	A	T	G	Q	N
Template Known Secondary structure		T	T										T	T														T						T	T	T											T	T		G	G	G			S												T	T							B	T	T	T	T	B	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	A	L	K	L	A	I	D	R	Y	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	K	A	V	E	T	L	L	D	L	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions