Job Description P33650 Confidence 99.41% Date Thu Jan 5 11:52:32 GMT 2012 Rank 48 Aligned Residues 146 % Identity 23% Template c2elfA_ PDB info PDB header:translation Chain: A: PDB Molecule:protein translation elongation factor 1a; PDBTitle: crystal structure of the selb-like elongation factor ef-pyl2 from methanosarcina mazei Resolution 1.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	T	I	G	L	I	G	N	P	N	S	G	K	T	T	L	F	N	Q	L	T	G	S	R	Q	R	V	G	N	W	A	G	V	T	V	E	R	K	E	G	Q	F	S	T	T	D	H	Q	V	T	L	V	D	L	P	G	T	Y	S	L	T	T	I	S	S	Q	T	S	L	D	E	Q	I	A	C	H	Y	I	L
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	A	N	V	A	I	I	G	T	E	K	S	G	R	T	S	L	A	A	N	L	G	.	.	.	.	.	.	.	.	K	K	G	T	S	S	D	I	T	X	Y	N	N	D	K	E	G	R	N	X	V	F	V	D	A	H	S	Y	P	K	T	.	.	.	.	.	.	.	.	.	.	.	.	L	K	S	L	I	T	A
Template Known Secondary structure										S	T	T	S	S							T	T	S	.	.	.	.	.	.	.	.						S	S	S							S	S	S	S								T	T	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.									.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.													.	.	.	.	.	.	60
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.							.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																		.																	.																												.	.	.	.	.	.													.
Query SS confidence																		.																	.																												.	.	.	.	.	.													.
Query Sequence		S	G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	.	E	R	N	L	Y	L	T	L	Q	L	L	E	L	G	I	P	.	C	I	V	A	L	N	M	L	D	I	A	E	K	Q	N	I	R	I	E	I	D	A	L	S	A	R	L	.	.	.	.	.	.	G	C	P	V	I	P	L	V	S	T	R	G	.
Query Conservation																		.																	.																												.	.	.	.	.	.													.
Alig confidence																		.																	.																												.	.	.	.	.	.													.
Template Conservation
Template Sequence		L	N	I	S	D	I	A	V	L	C	I	P	P	Q	G	L	D	A	H	T	G	E	C	I	I	A	L	D	L	L	G	F	K	H	G	I	I	A	L	T	R	S	D	S	T	H	X	H	A	I	D	E	L	K	A	K	L	K	V	I	T	S	G	T	V	L	Q	D	W	E	C	I	S	L	N	T	N	K	S	A
Template Known Secondary structure				T		S								T	T																T	T											G	G	G	S																T	T	T	S	T	T	T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
						154	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	R	G	I	E	A	L	K	L	A	I	D	R	Y	K	A
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		K	N	P	F	E	G	V	D	E	L	K	A	R	I	N	E	V	A	E
Template Known Secondary structure		S	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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