Job Description P33650 Confidence 99.43% Date Thu Jan 5 11:52:32 GMT 2012 Rank 46 Aligned Residues 152 % Identity 34% Template c2dy1A_ PDB info PDB header:signaling protein, translation Chain: A: PDB Molecule:elongation factor g; PDBTitle: crystal structure of ef-g-2 from thermus thermophilus Resolution 1.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.																.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	G	L	I	G	N	P	N	S	G	K	T	T	L	F	N	Q	L	.	.	.	T	G	S	R	Q	R	V	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	A	G	V	T	V	E	R	K	E	G	Q	F	S	T	T	D	H	Q	V	T	L	V	D	L	P	G	T	Y	S	L	T	T	I
Query Conservation																					.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		T	V	A	L	V	G	H	A	G	S	G	K	T	T	L	T	E	A	L	L	Y	K	T	G	A	K	E	R	R	G	R	V	E	E	G	T	T	T	T	D	Y	T	P	E	A	K	L	H	R	T	T	V	R	T	G	V	A	P	L	L	F	R	G	H	R	V	F	L	L	D	A	P	G	Y	G	D	F	.	.	.
Template Known Secondary structure								S	T	T	S	S												T	T	S	S	S	S				G	G	G	T			S	S			S						T	T	S			S									T	T											S	G	G	G	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																		.	.																																													.	.
Query SS confidence																																		.	.																																													.	.
Query Sequence		S	S	Q	T	S	L	D	E	Q	I	A	C	H	Y	I	L	S	G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	.	.	E	R	N	L	Y	L	T	L	Q	L	L	E	L	G	I	P	C	I	V	A	L	N	M	L	D	I	A	E	K	Q	N	I	R	I	E	I	D	A	L	S	A	R	L	G	.	.
Query Conservation																																		.	.																																													.	.
Alig confidence		.	.	.	.	.	.											.	.	.														.	.																											.	.																	.	.
Template Conservation		.	.	.	.	.	.											.	.	.																																										.	.
Template Sequence		.	.	.	.	.	.	V	G	E	I	R	G	A	L	E	A	.	.	.	A	D	A	A	L	V	A	V	S	A	E	A	G	V	Q	V	G	T	E	R	A	W	T	V	A	E	R	L	G	L	P	R	M	V	V	V	T	K	L	D	K	.	.	G	G	D	Y	Y	A	L	L	E	D	L	R	S	T	L	G	P	I
Template Known Secondary structure		.	.	.	.	.	.											.	.	.		S								T	T	T		S														T	T										G	G	G	.	.																	S
Template Predicted Secondary structure		.	.	.	.	.	.											.	.	.																																										.	.
Template SS confidence
								88	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	I	D	L	P	L	Y	E	G	G	K	W	V	G	L	I	D	V	F	H	G	K	A	Y	R	Y	E	N	G	E	E	R	E	A	E	V	P	P	E	E	R	E	R	V	Q	R	F	R	Q	E	V	L	E	A	I	V	E	T	D	E	G	L	L	E	K	Y	L	E	G	E	E	V	T	G	E	A	L	E	K
Template Known Secondary structure											T	T								T	T	T	T							T	T									G	G	G																	T	T											T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
													143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	C	P	V	I	P	L	V	S	T	R	G	R	G	I	E	A	L	K	L	A	I	D	R	Y	K	A	N	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	F	H	E	A	V	R	R	G	L	L	Y	P	V	A	L	A	S	G	E	R	E	I	G	V	L	P	L	L	E	L	I	L	E	A	L	P	S	P
Template Known Secondary structure									T	T	S								B	T	T	T	T	B	S												S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions