Job Description P33650 Confidence 92.38% Date Thu Jan 5 11:52:32 GMT 2012 Rank 418 Aligned Residues 174 % Identity 21% Template c2bekB_ PDB info PDB header:chromosome segregation Chain: B: PDB Molecule:segregation protein; PDBTitle: structure of the bacterial chromosome segregation protein2 soj Resolution 1.8 Å

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		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.							.	.	.	.	.	30																											.	.	.	.	.	.	.	.	.	40	.	.	.	.	.
Predicted Secondary structure											.																.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence											.																.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		M	K	K	L	T	I	G	L	I	.	G	N	P	N	S	G	K	T	T	L	F	N	Q	L	T	.	.	.	.	.	.	G	S	R	Q	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	W	A	G	V	T	V	E	R	K	E	G	Q	F	.	.
Query Conservation											.																.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence				.	.						.																.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation				.	.
Template Sequence		V	R	.	.	R	I	A	L	A	N	Q	K	G	G	V	G	K	T	T	T	A	I	N	L	A	A	Y	L	A	R	L	G	K	R	V	L	L	V	D	L	A	P	Q	G	N	A	T	S	G	L	G	V	R	A	E	R	G	V	Y	H	L	L	Q	G	E	P	L	E	G	L	V	H	P	V	D	G	F	H	L	L
Template Known Secondary structure				.	.							S	S	S	S	S	S														T	T	T										T	T							T	T				S	S	S						T	T			G	G	G	T					T	T
Template Predicted Secondary structure				.	.
Template SS confidence
		6	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
																										46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	D	H	Q	V	T	L	V	D	L	P	G	T	Y	S	L	T	T	I	S	S	Q	T	S	L	D	E	Q	I	A	C	H	Y	I	L	S	G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.							.	.																.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Sequence		P	A	T	P	D	L	V	G	A	T	V	E	L	A	G	A	P	T	A	L	R	E	A	L	R	D	E	G	Y	D	L	V	L	L	D	A	P	P	S	L	S	P	.	.	.	.	.	.	.	.	.	.	.	.	L	T	L	N	A	L	.	.	A	A	A	E	G	V	V	V	P	V	Q	A	E	Y	Y	A	L	E
Template Known Secondary structure					T	T								T	T	T		T	T									T	T		S								S	S		S		.	.	.	.	.	.	.	.	.	.	.	.							.	.				S								S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.													.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
				99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure		.	.																	.	.	.	.
Query SS confidence		.	.																	.	.	.	.
Query Sequence		.	.	E	R	N	L	Y	L	T	L	Q	L	L	E	L	G	I	P	.	.	.	.	C	I	V	A	L	N	M	L	D	I	A	E	K	Q	N	I	R	I	E	I	D	A	L	S	A	R	L	G	C	P	V	I	P	L	V	S	T	R	G	R	G	I	E	A	L	K	L	A	I	D	R	Y	K	A	N	E	N	V
Query Conservation		.	.																	.	.	.	.
Alig confidence		.	.																	.	.	.	.											.																																		.	.	.	.	.	.
Template Conservation																																		.																																		.	.	.	.	.	.
Template Sequence		G	V	A	G	L	L	A	T	L	E	E	V	R	A	G	L	N	P	R	L	R	L	L	G	I	L	V	T	M	Y	D	G	.	R	T	L	L	A	Q	Q	V	E	A	Q	L	R	A	H	F	G	E	K	V	F	W	T	V	I	P	R	N	V	R	L	A	E	.	.	.	.	.	.	A	P	S	F	G	K	T	I
Template Known Secondary structure																T	T		T	T										S	B		T	.	T	S															G	G	G	B		S				B								.	.	.	.	.	.	G	G	G	G	T
Template Predicted Secondary structure																																		.																																		.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	H	Y	A	Q	P	L	L	N	E	A	D	S	L	A	K	V	M	P	S	D	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	H	A	P	T	S	P	G	A	H	A	Y	R	R	L	A	E	E	V	M	A	R	V	Q
Template Known Secondary structure						T	T	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions