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Job DescriptionP33650
Confidence97.48%DateThu Jan 5 11:52:32 GMT 2012
Rank295Aligned Residues146
% Identity23%Templatec1zcbA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:g alpha i/13; PDBTitle: crystal structure of g alpha 13 in complex with gdp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.
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Query Sequence  KKLTIGLIGNPNSGKTTLFNQLTGSRQRVG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDAREKLHIPWGDNKNQLHGDKLMAFD
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TTTT


SSGGGTS
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   47..50.........60.........70.........80.........90.........100.........110.........120......
 
   32.......40
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NWAGVTVER
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Template Sequence  TRAPMAAQGMVETRVFLQYLPAIRALWEDSGIQNAYDRRREFQLGESVKYFLDNLDKLGVPDYIPSQQDILLARRPTKGI
Template Known Secondary structure  SSSTT



TGGGS


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   127..130.........140.........150.........160.........170.........180.........190.........200......
 
   41........50.........60.........70.........80.........90....... ..100.......
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Query Sequence  KEGQFSTTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYILSGDADLLINVVDASN. . . . . . . . . . . . . LERNLYLTLQ
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Template Sequence  HEYDFEIKNVPFKMVDVGG. . WFECF. . . . . . . . . . . . . . . . . DSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFET
Template Known Secondary structure  TT

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TTS
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TT
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   207..210.........220..... ....230 .........240.........250.........260.......
 
   108.110 .........120... ......130.........140. ........150.......
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Query Sequence  LLE. . . . LGIPCIVALNMLD. . . . . . . . . . . . . . . . . . IAEKQNIRIEIDALSARL. . . . . . . . GCPVIPLVSTRGRGIE
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Template Sequence  IVNNRVFSNVSIILFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDVQKFLVECFRGKRRDQQPLYHHFTTAINTENIR
Template Known Secondary structure  T
GGGTTS
TTT

GGGT
TT

S
TT
TT
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TT
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   275....280.........290.........300.........310.........320.........330.........340.........350....
 
   158.160......
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Query Sequence  ALKLAIDRY
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Template Sequence  LVFRDVKDT
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   357..360.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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