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Job DescriptionP33650
Confidence98.97%DateThu Jan 5 11:52:32 GMT 2012
Rank165Aligned Residues159
% Identity13%Templatec1zbdA_
PDB info PDB header:g proteinChain: A: PDB Molecule:rabphilin-3a; PDBTitle: structural basis of rab effector specificity: crystal2 structure of the small g protein rab3a complexed with the3 effector domain of rabphilin-3a
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  KKLTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYI
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Template Sequence  YXFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGLERYR. . . . . . . . . . TITTA
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   21........30.........40.........50.........60.........70.........80..... ....90
 
   82.......90........ .100.........110.........120.........130... ......140.........150....
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Query Sequence  LSGDADLLINVVDASNL. . . . . . ERNLYLTLQLLELGIPCIVALNMLDIAEKQNIRIE. IDALSARLGCPVIPLVSTRGR
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Template Sequence  YYRGAXGFILXYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDXEDERVVSSERGRQLADHLGFEFFEASAKDNI
Template Known Secondary structure  TGGG
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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   155....160.........170
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Query Sequence  GIEALKLAIDRYKANE
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Template Sequence  NVKQTFERLVDVICEK
Template Known Secondary structure  SS
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   171........180......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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