Job Description P33650 Confidence 99.29% Date Thu Jan 5 11:52:32 GMT 2012 Rank 72 Aligned Residues 164 % Identity 21% Template c1s0uA_ PDB info PDB header:translation Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit; PDBTitle: eif2gamma apo Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.																				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	T	I	G	L	I	G	N	P	N	S	G	K	T	T	L	F	N	Q	L	T	G	S	R	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	N	W	A	G	V	T	V	E	R	K	E	G	Q	F	S	T	T	D	H	Q	V	T	L	V	D	L	P	G	T	Y	S	L
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		E	V	N	I	G	M	V	G	H	V	D	H	G	K	T	S	L	T	K	A	L	T	G	V	W	T	D	R	G	I	S	I	R	L	G	Y	A	D	C	E	I	R	K	C	P	Q	C	G	T	Y	T	T	K	P	R	C	P	N	C	L	A	E	T	E	F	L	R	R	V	S	F	V	D	S	P	G	H	.	.	.
Template Known Secondary structure									S		T	T	S	S										S																						T	T	T					S	S	S	B		T	T	S			B													S	S		.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.															.
Query SS confidence																																						.	.	.															.
Query Sequence		T	T	I	S	S	Q	T	S	L	D	E	Q	I	A	C	H	Y	I	L	S	G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	E	.	.	.	R	N	L	Y	L	T	L	Q	L	L	E	L	G	I	.	P	C	I	V	A	L	N	M	L	D	I	A	E	K	Q	N	I	R	I	E	I	D	A	L	S	A
Query Conservation																																						.	.	.															.
Alig confidence		.	.	.	.	.	.	.	.	.																												.	.	.															.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	E	T	L	M	A	T	M	L	S	G	A	S	L	M	D	G	A	I	L	V	I	A	A	N	E	P	C	P	Q	P	Q	T	K	E	H	L	M	A	L	E	I	L	G	I	D	K	I	I	I	V	Q	N	K	I	D	L	V	D	E	K	Q	A	E	E	N	Y	E	Q	I	K	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.									T	T		S			S								T	T	S		S	S														T	T											T	T	S	S		T	T	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	G	C	P	V	I	P	L	V	S	T	R	G	R	G	I	E	A	L	K	L	A	I	D	R	Y	K	A	N	E	N	V	E	L	V	H	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	K	G	T	I	A	E	N	A	P	I	I	P	I	N	I	D	V	L	L	K	A	I	Q	D	F	I	P	T	P	K	R	D	P	D	A	T	P
Template Known Secondary structure				T	T	S	T	T	T	T																			S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions