Job Description P33650 Confidence 96.78% Date Thu Jan 5 11:52:32 GMT 2012 Rank 304 Aligned Residues 141 % Identity 20% Template c1nijA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein yjia; PDBTitle: yjia protein Resolution 2.00 Å

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		3	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.
Predicted Secondary structure									.																			.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.																			.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	T	I	G	L	I	.	G	N	P	N	S	G	K	T	T	L	F	N	Q	L	T	G	S	R	.	.	.	.	.	Q	R	V	G	N	W	A	G	V	T	V	E	R	K	E	G	Q	F	S	T	T	D	H	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation									.																			.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																			.	.	.	.	.									.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.
Template Sequence		P	I	A	V	T	L	L	T	G	F	L	G	A	G	K	T	T	L	L	R	H	I	L	N	E	Q	H	G	Y	K	I	A	V	I	E	N	E	F	G	.	E	V	S	V	D	D	Q	L	I	G	D	R	A	T	Q	I	K	T	L	T	N	G	C	I	C	C	S	R	S	N	E	L	E	D	A	L	L	D	L	L
Template Known Secondary structure											S	S	S	S	S											S											S	S			.	S										T	T	S							T	T	S						T	T	S
Template Predicted Secondary structure																																									.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
													52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																																												.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																																												.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	V	T	L	V	D	L	P	G	T	Y	S	L	T	T	I	S	S	Q	T	S	L	D	E	Q	I	A	C	H	Y	I	L	S	G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	E	R	N	L	Y	L	T	L	Q	L	L	E	.	L	G	I	P	C	I	V	A	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																																												.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.																									.
Template Conservation																																												.	.	.	.
Template Sequence		D	N	L	D	K	G	N	I	Q	F	D	R	L	V	I	E	C	T	G	M	A	D	P	G	P	I	I	Q	T	F	F	S	H	E	V	L	C	Q	R	Y	L	L	.	.	.	.	D	G	V	I	A	L	V	D	A	V	H	A	D	E	Q	M	N	Q	F	T	I	A	Q	S	Q	V	G	Y	A	D	R	I	L	L
Template Known Secondary structure							T	S				S								T	T													S										.	.	.	.									T	T	T																	T		S
Template Predicted Secondary structure																																												.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	L	D	I	A	E	K	Q	N	I	R	I	E	I	D	A	L	S	A	R	L	G	C	P	V	I	P	L	V
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		T	K	T	D	V	A	G	E	A	.	E	K	L	H	E	R	L	A	R	I	N	A	R	A	P	V	Y	T	V	T
Template Known Secondary structure				T	T	T		S		T	.												S	S	S
Template Predicted Secondary structure											.
Template SS confidence
		158	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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