Job Description P33650 Confidence 99.38% Date Thu Jan 5 11:52:32 GMT 2012 Rank 57 Aligned Residues 156 % Identity 26% Template c1g7tA_ PDB info PDB header:translation Chain: A: PDB Molecule:translation initiation factor if2/eif5b; PDBTitle: x-ray structure of translation initiation factor if2/eif5b2 complexed with gdpnp Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.									.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.								.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.								.	.	.	.	.	.	.	.
Query Sequence		M	K	K	L	T	I	G	L	I	G	N	P	N	S	G	K	T	T	L	F	N	Q	L	T	G	S	R	.	.	.	.	.	.	Q	R	V	G	N	W	A	.	.	.	.	.	.	.	.	G	V	T	V	E	R	K	E	G	Q	F	S	T	T	D	H	Q	V	T	L	V	D	L	P	G	T	Y	S	L	T	T	I
Query Conservation																													.	.	.	.	.	.								.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	R	S	P	I	V	S	V	L	G	H	V	D	H	G	K	T	T	L	L	D	H	I	R	G	S	A	V	A	S	R	I	T	Q	H	I	G	A	T	E	I	P	M	D	V	I	E	G	I	C	G	D	F	L	K	K	F	S	I	R	E	T	L	P	G	L	F	F	I	D	T	P	G	H	E	A	F	T	T	L
Template Known Secondary structure												S	T	T	S	S														T	T						T	T													S		G	G	G	T	T		G	G	G	G	T											T	T	T		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	Q	T	S	L	D	E	Q	I	A	C	H	Y	I	L	S	G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	.	.	E	R	N	L	Y	L	T	L	Q	L	L	E	L	G	I	P	C	I	V	A	L	N	M	L	D	I	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.																.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	R	G	G	.	.	.	.	.	.	.	.	.	.	.	.	A	L	A	D	L	A	I	L	I	V	D	I	N	E	G	F	K	P	Q	T	Q	E	A	L	N	I	L	R	M	Y	R	T	P	F	V	V	A	A	N	K	I	D	R	I	H	G	W	R	V	H	E	G	R	P	F	M	E	T	F	S	K	Q	D
Template Known Secondary structure				T	T		.	.	.	.	.	.	.	.	.	.	.	.		S		S								T	T	T																T	T										G	G	G	S	T	T					T	T								T	T	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.													.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
									127	.	.	130	.	.	.	.	.	.	.	.	.	140															.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	K	Q	N	I	R	I	E	I	D	A	L	S	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	C	P	V	I	P	L	V	S	T	R	G	R	G	I	E	A	L	K	L	A	I	D	R	Y	K	A
Query Conservation		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	V	Q	Q	K	L	D	T	K	V	Y	E	L	V	G	K	L	H	E	E	G	F	E	S	E	R	F	D	R	V	T	D	F	A	S	Q	V	S	I	I	P	I	S	A	I	T	G	E	G	I	P	E	L	L	T	M	L	M	G	L	A	Q
Template Known Secondary structure																						T	T						T	T	T		S		T	T	T	S								S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions