Job Description P33650 Confidence 99.22% Date Thu Jan 5 11:52:32 GMT 2012 Rank 86 Aligned Residues 143 % Identity 26% Template c1g7cA_ PDB info PDB header:translation Chain: A: PDB Molecule:elongation factor 1-alpha; PDBTitle: yeast eef1a:eef1ba in complex with gdpnp Resolution 2.05 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.																																.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	L	T	I	G	L	I	G	N	P	N	S	G	K	T	T	L	F	N	Q	L	T	G	S	R	Q	R	V	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	A	G	V	T	V	E	R	K	E	G	Q	F	S	T	T	D	H
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	H	I	N	V	V	V	I	G	H	V	D	S	G	K	S	T	T	T	G	H	L	I	Y	K	C	G	G	I	D	K	R	T	I	E	K	F	E	K	E	A	A	E	L	G	K	G	S	F	K	Y	A	W	V	L	D	K	L	K	A	E	R	E	R	G	I	T	I	D	I	A	L	W	K	F	E	T	P	K	Y
Template Known Secondary structure												T	T	S														S		S	S											G	G	G	G	S	S	S																		T				S		S							S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.										100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.																.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.																.
Query Sequence		Q	V	T	L	V	D	L	P	G	T	Y	S	L	T	T	I	S	S	Q	T	S	L	D	E	Q	I	A	C	H	Y	I	L	S	G	D	A	D	L	L	I	N	V	V	D	A	S	N	L	E	.	.	.	.	.	.	.	.	.	R	N	L	Y	L	T	L	Q	L	L	E	L	G	I	P	.	C	I	V	A	L	N
Query Conservation																																																			.	.	.	.	.	.	.	.	.																.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.																.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	T	V	I	D	A	P	G	H	R	D	F	.	.	.	.	.	.	.	.	.	.	.	.	I	K	N	M	I	T	G	T	S	Q	A	D	C	A	I	L	I	I	A	G	G	V	G	E	F	E	A	G	I	S	K	D	G	Q	T	R	E	H	A	L	L	A	F	T	L	G	V	R	Q	L	I	V	A	V	N
Template Known Secondary structure												T	T		.	.	.	.	.	.	.	.	.	.	.	.							S	S	S			S									S								T		T	T													T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.													.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.									.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure															.	.									.	.	.	.	.	.	.	.
Query SS confidence															.	.									.	.	.	.	.	.	.	.
Query Sequence		M	L	D	I	A	E	K	Q	N	I	R	I	E	.	.	I	D	A	L	S	A	R	L	.	.	.	.	.	.	.	.	G	C	P	V	I	P	L	V	S	T	R	G	R	G	I
Query Conservation															.	.									.	.	.	.	.	.	.	.
Alig confidence															.	.									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	M	D	S	V	K	W	D	E	S	R	F	Q	E	I	V	K	E	T	S	N	F	I	K	K	V	G	Y	N	P	K	T	V	P	F	V	P	I	S	G	W	N	G	D	N	M
Template Known Secondary structure			T	T	T	T	T	T																				T			G	G	G								T	T	T		B	T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions