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Job DescriptionP33650
Confidence99.41%DateThu Jan 5 11:52:32 GMT 2012
Rank49Aligned Residues164
% Identity23%Templatec1d2eA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:elongation factor tu (ef-tu); PDBTitle: crystal structure of mitochondrial ef-tu in complex with gdp
Resolution1.94 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.... .....40.........50.........60.....
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Query Sequence  KKLTIGLIGNPNSGKTTLFNQLTGSRQRVGNWA. . . . . . . . . . . . . . . . GVTVERKEGQFSTTDHQVTLVDLPGTYSLTT
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Template Sequence  PHVNVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDCPGH. . . . .
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   56...60.........70.........80.........90.........100.........110.........120.........130
 
   66...70.........80.........90........ .100.........110... ......120.........130.........140.
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Query Sequence  ISSQTSLDEQIACHYILSGDADLLINVVDASNL. . ERNLYLTLQLLELGI. PCIVALNMLDIAEKQNIRIEIDALSARL.
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Template Sequence  . . . . . . . ADYVKNMITGTAPLDGCILVVAANDGPMPQTREHLLLARQIGVEHVVVYVNKADAVQDSEMVELVELEIRELL
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   131........140.........150.........160.........170.........180.........190.........200...
 
   142.......150...... ...160.........170.......
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Query Sequence  . . . . . . . . GCPVIPLVSTRGRGI. . . . . . . . . . EALKLAIDRYKANENVELVHY
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Template Sequence  TEFGYKGEETPIIVGSALCALEQRDPELGLKSVQKLLDAVDTYIPVPTRDLEKP
Template Known Secondary structure  TTS
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   204.....210.........220.........230.........240.........250.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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