Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAS5
Confidence6.62%DateThu Jan 5 11:13:41 GMT 2012
Rank33Aligned Residues67
% Identity16%Templated2eiaa2
SCOP infoRetrovirus capsid protein, N-terminal core domain Retrovirus capsid protein, N-terminal core domain Retrovirus capsid protein, N-terminal core domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   106...110.........120.... .....130.........140.. .......150.........160. .
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Query Sequence  QPLAAAWMQRAEETGLFGP. . . . . LALAASDPLPAELRQFRH. . . . . . . . . . CFQAALNGVKTDWRHWLGK. . . . . . . . G
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Template Sequence  PRGYTTWVNTIQTNGLLNEASQNLFGILSVDCTSEEMNAFLDVVPGQAGQKQILLDAIDKIADDWDNRHPLPNAPLVAPP
Template Known Secondary structure 
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   17..20.........30.........40.........50.........60.........70.........80.........90......
 
   163.... ..170..
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Query Sequence  PGLTP. SHDDT
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Template Sequence  QGPIPMTARFI
Template Known Secondary structure  SS




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   97..100.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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